Gene detail information of Glyur004830s00041942 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G36810.1 | 7.00E-106 | ARM repeat superfamily protein |
| NR | XP_006604597.1 | 1.32E-166 | PREDICTED: maestro heat-like repeat-containing protein family member 1-like isoform X5 [Glycine max] |
| Swissprot | tr|F4IP13|SHGR6_ARATH | 5.00E-129 | Protein SHOOT GRAVITROPISM 6 |
| trEMBL | tr|K7MZ41|K7MZ41_SOYBN | 6.00E-166 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G37085.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04830 | 699 | 7576 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.809 |
| SRR1783600 | control | 4.522 |
| SRR1783602 | moderate drought stress | 6.885 |
| SRR1811619 | moderate drought stress | 6.418 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.383 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.534 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.316 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.537 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.723 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.635 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.462 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.448 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.833 |
| SRR2868004 | Drought Stress (root) | 11.129 |
| SRR2967015 | Control (root) | 11.321 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.349 |
| SRR9715740 | Leaf | 3.641 |
| SRR9715741 | Leaf | 3.863 |
| SRR9715739 | Root | 2.217 |
| SRR9715742 | Root | 12.011 |
| SRR9715743 | Root | 7.390 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.681 |
| SRR8749028 | MeJA induced 9h | 6.921 |
| SRR8749029 | MeJA induced 9h | 2.492 |
| SRR8749030 | Uninduced | 2.412 |
| SRR8749031 | Uninduced | 2.399 |
| SRR8749032 | Uninduced | 0.662 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.591 |
| SRR8400027 | Control - Root | 17.801 |