Gene detail information of Glyur004778s00044591 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G30770.1 | 1.00E-25 | cytochrome P450, family 71, subfamily A, polypeptide 13 |
| NR | XP_004512940.1 | 6.27E-97 | PREDICTED: cytochrome P450 71A1-like [Cicer arietinum] |
| COG | YP_003270382.1 | 5.00E-08 | cytochrome P450 [Haliangium ochraceum DSM 14365] |
| Swissprot | tr|H2DH18|C7A12_PANGI | 3.00E-60 | Cytochrome P450 CYP736A12 |
| trEMBL | tr|G7L915|G7L915_MEDTR | 3.00E-77 | Cytochrome P450 family 71 protein {ECO:0000313|EMBL:AET05315.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04778 | 12062 | 12715 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP71A13 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur004778s00044591.1 | PF00067.17 | p450 | 36 | 198 | 2.80E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.329 |
| SRR1783600 | control | 2.140 |
| SRR1783602 | moderate drought stress | 2.991 |
| SRR1811619 | moderate drought stress | 2.537 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.103 |
| SRR2868004 | Drought Stress (root) | 8.951 |
| SRR2967015 | Control (root) | 13.192 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 2.117 |
| SRR9715742 | Root | 2.924 |
| SRR9715743 | Root | 3.470 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.052 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.050 |
| SRR8749031 | Uninduced | 0.059 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.435 |
| SRR8400027 | Control - Root | 10.479 |