Gene detail information of Glyur004742s00043461 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G35510.1 | 2.00E-17 | |
| NR | XP_004509445.1 | 0 | PREDICTED: transcriptional regulator ATRX homolog isoform X1 [Cicer arietinum] |
| trEMBL | tr|A0A072TS82|A0A072TS82_MEDTR | 0 | Uncharacterized protein {ECO:0000313|EMBL:KEH20349.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04742 | 10641 | 11786 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.852 |
| SRR1783600 | control | 16.861 |
| SRR1783602 | moderate drought stress | 14.828 |
| SRR1811619 | moderate drought stress | 14.769 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 35.572 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 34.848 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 31.888 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 30.795 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 77.199 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 77.006 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 21.675 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 21.209 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 31.785 |
| SRR2868004 | Drought Stress (root) | 51.324 |
| SRR2967015 | Control (root) | 54.536 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 90.411 |
| SRR9715740 | Leaf | 61.556 |
| SRR9715741 | Leaf | 85.305 |
| SRR9715739 | Root | 19.501 |
| SRR9715742 | Root | 56.240 |
| SRR9715743 | Root | 52.298 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 30.989 |
| SRR8749028 | MeJA induced 9h | 50.103 |
| SRR8749029 | MeJA induced 9h | 50.647 |
| SRR8749030 | Uninduced | 60.512 |
| SRR8749031 | Uninduced | 96.679 |
| SRR8749032 | Uninduced | 87.119 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 29.784 |
| SRR8400027 | Control - Root | 26.868 |