Gene detail information of Glyur004681s00043419 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G68820.1 | 2.00E-04 | Transmembrane Fragile-X-F-associated protein |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04681 | 5852 | 12677 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.941 |
| SRR1783600 | control | 2.635 |
| SRR1783602 | moderate drought stress | 2.875 |
| SRR1811619 | moderate drought stress | 2.559 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.067 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.113 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.225 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.151 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.158 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.111 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.516 |
| SRR2868004 | Drought Stress (root) | 13.729 |
| SRR2967015 | Control (root) | 12.466 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.238 |
| SRR9715740 | Leaf | 1.882 |
| SRR9715741 | Leaf | 1.951 |
| SRR9715739 | Root | 0.234 |
| SRR9715742 | Root | 0.833 |
| SRR9715743 | Root | 0.844 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.718 |
| SRR8749028 | MeJA induced 9h | 1.222 |
| SRR8749029 | MeJA induced 9h | 0.431 |
| SRR8749030 | Uninduced | 0.383 |
| SRR8749031 | Uninduced | 0.162 |
| SRR8749032 | Uninduced | 0.129 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.630 |
| SRR8400027 | Control - Root | 4.540 |