Gene detail information of Glyur004632s00040689 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G14750.1 | 2.00E-24 | IQ-domain 19 |
| NR | KHN31452.1 | 7.18E-162 | Protein IQ-DOMAIN 31 [Glycine soja] |
| Swissprot | tr|Q8L4D8|IQD31_ARATH | 5.00E-16 | Protein IQ-DOMAIN 31 |
| trEMBL | tr|I1JRM1|I1JRM1_SOYBN | 3.00E-162 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G40630.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04632 | 5602 | 7281 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur004632s00040689.1 | PF00612.22 | IQ | 116 | 134 | 4.60E-06 |
| Glyur004632s00040689.1 | PF00612.22 | IQ | 141 | 155 | 0.0062 |
| Glyur004632s00040689.1 | PF13178.1 | DUF4005 | 289 | 347 | 8.90E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.448 |
| SRR1783600 | control | 0.448 |
| SRR1783602 | moderate drought stress | 0.920 |
| SRR1811619 | moderate drought stress | 0.950 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.605 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.541 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.025 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.907 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.663 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.649 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.954 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.116 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.529 |
| SRR2868004 | Drought Stress (root) | 3.632 |
| SRR2967015 | Control (root) | 6.415 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.722 |
| SRR9715740 | Leaf | 1.658 |
| SRR9715741 | Leaf | 0.988 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.286 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.943 |
| SRR8749028 | MeJA induced 9h | 3.507 |
| SRR8749029 | MeJA induced 9h | 2.571 |
| SRR8749030 | Uninduced | 3.124 |
| SRR8749031 | Uninduced | 2.750 |
| SRR8749032 | Uninduced | 2.717 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.985 |
| SRR8400027 | Control - Root | 1.194 |