Gene detail

Gene detail information of Glyur004599s00040385

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G04030.1	0	Chaperone protein htpG family protein
NR	XP_003518802.1	0	PREDICTED: heat shock protein 83-like [Glycine max]
COG	YP_634186.1	8.00E-153	heat shock protein 90 [Myxococcus xanthus DK 1622]
Swissprot	tr\|P36183\|ENPL_HORVU	0	Endoplasmin homolog (Precursor)
trEMBL	tr\|I1JEL6\|I1JEL6_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA02G13790.1}

Sequence

Transcript Sequence

>Glyur004599s00040385.1
GTTTGATAGAAAAAAAAAGAAACGAAACGATACGGCAAGTTGTGTGGCTGAATTGGCATAACCTAGGCCTTTCAAATCGACAGTCACACAGATGCAGCCAAGCGCTTCGTTTCTTCTAGAACCATCTCCTATATCTCCATAAACCCTTCTTTTTAATTCCCAGTTTCAAGGGTTTTTCATTTCCCATTTCCACCCTCACTCACTCTCCCACTCATCCATCATACACACAAAACAAAGAGATAACATAACACTCAAAACACACAGAAGCACTCACTCATCAATAATGGCTCCTGTGCTTAGCAGCAGAACAAACATGGCCACTGCCTCTCTCGCCTCCCTCCCTTCCTCTTCCCCCTTCGCACCCACAAGGNCTTCCTCCGCTCTCAGGAGCGCTTTTCTGCCCCCGCAACCCTGCCGCAGAAAGTGCTTCTCTTCCGCCGCCGCGTTGAAGTGGAAGCTCCACCGTGAGGGAAGACGAAACGGCAGGCTCGCTGTGCGTTGCGATGCTGCGGTTGCAGAGAAAGAAGAGGCAACTGGGGAGGAGAAGTTCGAGTACCAAGCCGAGGTGACTCGGTTGTTGGATTTGATTGTTCACAGTCTGTATAGCCACAAGGAAGTTTTCCTTCGAGAACTTGTGAGTAATGCTAGTGATGCTTTGGACAAGTTGAGGTTTTTAAGTGTGACCGAGCCTTCTTTGCTTGGAGATTCTGGAGAACTAGAGATACGCATCAAGCCTGATCCAGACAATGGAACTATTACTATAACAGACACTGGTATTGGAATGACCAAAGAAGAGCTCNTTGATTGTCTTGGTACCATTGCTCAGAGTGGTACCTCAAAATTTTTGAAGGCGCTTAAGGAAAACAAGGATCTAGGAGCAGATAATGGTTTGATTGGTCAATTTGGTGTCGGGTTCTACTCTGCTTTTCTTGTTGCTGAGAGGGTTGTTGTTTCTACAAAGAGCCCTAGATCTGATAAGCAATATGTGTGGGAAGCAGTAGCTGACAGTAGCTCTTATGTGATTAGGGAAGAAACTGATCCTGAAAAGATTCTGCGTCGTGGTACACAGATCACACTCTATTTAAGACCGGATGACAAGTATGAATTCTCAGAACCAACCAAAATTCAGAGTTTGGTGAAGAATTACTCACAGTTTGTTTCCTTCCCCATCTATACATGGCAAGAAAAATCAAGAACTGTGGAGGTGGAAGAGGAAGAAGAACCTAAAGAAGGGGAAGAACCAAAAGCAGAGGGTGATAAAAAGAAGGAAAAAAAGACTAAAACTGAGAAGTATTGGGACTGGGAATTAGCCAATGAAACAAAGCCAATATGGATGCGGAGTCCAAAGGATGTTGAAAAGGATGAGTACAATGAGTTTTACAAGAAGACTTTTAATGAATTCTTAGAACCACTTGCATATACTCACTTCACTACTGAGGGTGAGGTTGAGTTCAGAAGCATTCTATATGTTCCAGGAATGGGACCTCTTAACAATGAAGAAGTAGTGAACCCTAAAACAAAGAACATACGGCTGTATGTTAAACGTGTGTTCATCTCAGATGATTTTGATGGTGAGCTGTTTCCGCGTTACTTGAGCTTTGTGAAGGGTGTGGTTGATTCAAATGATCTTCCTCTGAATGTTTCTCGTGAGATCCTTCAGGAAAGCAGAATTGTAAGAATAATGAGAAAGAGACTTGTCAGGAAGGCATTTGATATGATTCAAGATATTTCTGAAAGTGAAAATAAAGAGGATTACAAGAAATTCTGGGAGAACTTTGGTAGGTTCATAAAGTTAGGATGCATTGAAGACACTGGAAATCATAAGCGCATAACACCACTATTGAGGTTTTTCACTTCCAAAAGTGAGGAGGAACTTAAAAGCCTAGATGATTATGTTGAAAACATGGGTGAAAACCAAAAAGCTATCTATTATCTAGCAGCTGACAGCTTGAAAAGTGCAAAGACTGCTCCATTTTTAGAGAAATTACTTCAAAAAGATATTGAGGTTCTTTATTTGGTTGAACCTATTGATGAGGTTGCCATTCAGAACCTACAGACATACAAAGAAAAGAAATTTGTTGATATCAGCAAGGAAGATTTGGAATTGGGTGATGAGGATGAGGTCAAAGAGAGGGAAATCAAGCAAGAATACAACCTACTTTGTGATTGGATAAAACAACAGCTTGGTGATAAGGTGGCAAAAGTTCAAGTCTCTAAGCGCTTGAGCTCATCTCCCTGTGTGCTTGTATCTGGGAAGTTTGGTTGGTCTGCAAATATGGAGAGATTAATGAAGGCACAAGCTCTTGGAGACACTGCAAGTTTGGAGTTCATGAGAGGGAGGAGAATATTGGAGATTAATCCAGATCATCCCATTATCAAAGACTTAAGTGCTGCCAGCAAGAATGCACCTGACAGCAGTGAAGCTAAGAGAGCTGTTGATCTNTTATATGATACAGCACTAATTTCCAGTGGATTTTCTCCGGACAGCCCTGCTGAGTTGGGAAGTAAGATTTATGGAATGATGGCATTGGCCTTGGGAGGAAGATGGGGTAGAACAGAAGAGGAGGGAGATGCACCAGTTGAAGCTGGTGATTCAAACTCAAGTGAAGAAGCTACAGCTACAGAGCCTGAAGTTTATGAAGCTTCTGAAGTCATAGCAGAGAGTGATCCTTGGACAACTGATTAGGTGTCTTATTCCCTTATATAGAATAAATTAAAAATTTTGGGCATGATAGGTAATGATGCATAATGAAGCAAAAGGAAAGGAAGAGGCCCTGAATGATTGATTCTTCATATGATTTGTTGGTGCTGAAGGAAACATGTAATGTCATGTAGAACTGTGTGAATGCCATAAAAGGAACTAGTCCTATGGGGGCCCCTTTCCTATGTAATTGGGATCCAGTTTGGGAGGTGAGAACGTTTTTGTCACTTCATGGTCATGCGTC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold04599	4701	12366	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006457 protein folding

GO:0006950 response to stress

molecular_function

GO:0005524 ATP binding

GO:0051082 unfolded protein binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur004599s00040385.1	PF02518.21	HATPase_c	114	268	1.20E-11
Glyur004599s00040385.1	PF00183.13	HSP90	275	778	1.90E-174

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	24.977
SRR1783600	control	24.977
SRR1783602	moderate drought stress	29.076
SRR1811619	moderate drought stress	29.031

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	44.051
DRR006520	Root Summer glycyrrhizin high producing strain	43.571
DRR006521	Root Winter glycyrrhizin high producing strain	9.432
DRR006522	Root Winter glycyrrhizin high producing strain	9.086
DRR006523	Root Summer glycyrrhizin low producing strain	37.806
DRR006524	Root Summer glycyrrhizin low producing strain	37.616
DRR006525	Leaf Summer glycyrrhizin high producing strain	65.127
DRR006526	Leaf Summer glycyrrhizin high producing strain	64.733

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	52.019
SRR2868004	Drought Stress (root)	38.051
SRR2967015	Control (root)	35.442

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	73.774
SRR9715740	Leaf	175.455
SRR9715741	Leaf	93.993
SRR9715739	Root	3.090
SRR9715742	Root	30.442
SRR9715743	Root	26.349

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	52.772
SRR8749028	MeJA induced 9h	31.012
SRR8749029	MeJA induced 9h	26.842
SRR8749030	Uninduced	4.743
SRR8749031	Uninduced	2.059
SRR8749032	Uninduced	2.493

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	62.010
SRR8400027	Control - Root	50.760