Gene detail information of Glyur004519s00046685 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003532914.1 | 2.15E-31 | PREDICTED: uncharacterized protein LOC100795419 [Glycine max] |
| trEMBL | tr|I1KTX2|I1KTX2_SOYBN | 8.00E-32 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G17540.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04519 | 11243 | 12574 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.445 |
| SRR1783600 | control | 2.601 |
| SRR1783602 | moderate drought stress | 3.093 |
| SRR1811619 | moderate drought stress | 2.586 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.842 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.210 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.675 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.444 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.897 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.728 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.149 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.695 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.521 |
| SRR2868004 | Drought Stress (root) | 1.339 |
| SRR2967015 | Control (root) | 1.736 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.530 |
| SRR9715740 | Leaf | 43.126 |
| SRR9715741 | Leaf | 14.762 |
| SRR9715739 | Root | 0.283 |
| SRR9715742 | Root | 1.295 |
| SRR9715743 | Root | 1.221 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.767 |
| SRR8749028 | MeJA induced 9h | 0.369 |
| SRR8749029 | MeJA induced 9h | 0.388 |
| SRR8749030 | Uninduced | 2.096 |
| SRR8749031 | Uninduced | 0.185 |
| SRR8749032 | Uninduced | 0.637 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.347 |
| SRR8400027 | Control - Root | 4.020 |