Gene detail information of Glyur004498s00044332 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G14880.4 | 3.00E-05 | O-acetylserine (thiol) lyase (OAS-TL) isoform A1 |
| NR | XP_004174202.1 | 9.27E-07 | PREDICTED: cysteine synthase-like, partial [Cucumis sativus] |
| Swissprot | tr|Q43317|CYSK_CITLA | 3.00E-07 | Cysteine synthase |
| trEMBL | tr|A0A067EQV2|A0A067EQV2_CITSI | 3.00E-06 | Uncharacterized protein {ECO:0000313|EMBL:KDO53281.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04498 | 886 | 1877 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.160 |
| SRR1783600 | control | 1.072 |
| SRR1783602 | moderate drought stress | 0.547 |
| SRR1811619 | moderate drought stress | 0.576 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.183 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.216 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.164 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.343 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.801 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.090 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.100 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.019 |
| SRR2868004 | Drought Stress (root) | 0.029 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.401 |
| SRR9715740 | Leaf | 2.648 |
| SRR9715741 | Leaf | 1.919 |
| SRR9715739 | Root | 0.654 |
| SRR9715742 | Root | 1.966 |
| SRR9715743 | Root | 0.983 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.730 |
| SRR8400027 | Control - Root | 4.742 |