Gene detail information of Glyur004465s00040479 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | Q40361.1 | 9.23E-14 | RecName: Full=Early nodulin-12A; Short=N-12A; AltName: Full=Early nodulin-NMS-8; Flags: Precursor [Medicago sativa] |
| Swissprot | tr|Q40361|NO12A_MEDSA | 4.00E-16 | Early nodulin-12A (Precursor) |
| trEMBL | tr|B5A8N7|B5A8N7_PEA | 1.00E-12 | Early nodulin protein 12A {ECO:0000313|EMBL:ACF72661.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04465 | 1091 | 1345 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 263.723 |
| SRR1783600 | control | 269.112 |
| SRR1783602 | moderate drought stress | 408.201 |
| SRR1811619 | moderate drought stress | 406.257 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.756 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 27.993 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6356.966 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6243.136 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.137 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.266 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2211.487 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2191.478 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.468 |
| SRR2868004 | Drought Stress (root) | 1.653 |
| SRR2967015 | Control (root) | 6.661 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6760.622 |
| SRR9715740 | Leaf | 4254.313 |
| SRR9715741 | Leaf | 3343.022 |
| SRR9715739 | Root | 54.188 |
| SRR9715742 | Root | 320.476 |
| SRR9715743 | Root | 254.168 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 69.097 |
| SRR8400027 | Control - Root | 49.465 |