Gene detail information of Glyur004458s00043008 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004496593.1 | 2.43E-12 | PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like [Cicer arietinum] |
| trEMBL | tr|K7LL44|K7LL44_SOYBN | 1.00E-11 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G38280.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04458 | 9923 | 12052 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.945 |
| SRR1783600 | control | 2.157 |
| SRR1783602 | moderate drought stress | 5.406 |
| SRR1811619 | moderate drought stress | 5.575 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.484 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.351 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.357 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.009 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.869 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.347 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.247 |
| SRR2868004 | Drought Stress (root) | 0.803 |
| SRR2967015 | Control (root) | 0.177 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.053 |
| SRR9715740 | Leaf | 0.576 |
| SRR9715741 | Leaf | 3.813 |
| SRR9715739 | Root | 0.024 |
| SRR9715742 | Root | 0.415 |
| SRR9715743 | Root | 0.080 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.034 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.396 |
| SRR8400027 | Control - Root | 5.178 |