Gene detail information of Glyur004432s00042487 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G26630.1 | 3.00E-14 | Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein |
| NR | XP_010938815.1 | 1.65E-15 | PREDICTED: eukaryotic translation initiation factor 5A [Elaeis guineensis] |
| Swissprot | tr|Q93VP3|IF5A2_ARATH | 8.00E-17 | Eukaryotic translation initiation factor 5A-2 |
| trEMBL | tr|I1KCW5|I1KCW5_SOYBN | 7.00E-16 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G21290.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04432 | 1680 | 8761 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.915 |
| SRR1783600 | control | 0.882 |
| SRR1783602 | moderate drought stress | 2.493 |
| SRR1811619 | moderate drought stress | 2.631 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.964 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.867 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.801 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.885 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.822 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.023 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.286 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.458 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.956 |
| SRR2868004 | Drought Stress (root) | 1.961 |
| SRR2967015 | Control (root) | 2.580 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.832 |
| SRR9715740 | Leaf | 0.278 |
| SRR9715741 | Leaf | 0.463 |
| SRR9715739 | Root | 0.179 |
| SRR9715742 | Root | 0.487 |
| SRR9715743 | Root | 0.750 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.129 |
| SRR8749028 | MeJA induced 9h | 8.391 |
| SRR8749029 | MeJA induced 9h | 3.235 |
| SRR8749030 | Uninduced | 5.784 |
| SRR8749031 | Uninduced | 7.945 |
| SRR8749032 | Uninduced | 2.345 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.851 |
| SRR8400027 | Control - Root | 1.720 |