Gene detail information of Glyur004404s00039381 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004492972.1 | 2.91E-26 | PREDICTED: keratin-associated protein 21-1-like [Cicer arietinum] |
| trEMBL | tr|U7DYE4|U7DYE4_POPTR | 1.00E-15 | Glycine-rich family protein {ECO:0000313|EMBL:ERP46578.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04404 | 7091 | 8170 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.919 |
| SRR1783600 | control | 0.759 |
| SRR1783602 | moderate drought stress | 0.376 |
| SRR1811619 | moderate drought stress | 0.219 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.816 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.276 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.517 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.024 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.164 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.165 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.051 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.229 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.541 |
| SRR2868004 | Drought Stress (root) | 2.524 |
| SRR2967015 | Control (root) | 1.668 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.297 |
| SRR9715740 | Leaf | 5.652 |
| SRR9715741 | Leaf | 3.344 |
| SRR9715739 | Root | 2.410 |
| SRR9715742 | Root | 2.823 |
| SRR9715743 | Root | 4.029 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.368 |
| SRR8749028 | MeJA induced 9h | 0.197 |
| SRR8749029 | MeJA induced 9h | 0.431 |
| SRR8749030 | Uninduced | 0.148 |
| SRR8749031 | Uninduced | 0.400 |
| SRR8749032 | Uninduced | 0.246 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.617 |
| SRR8400027 | Control - Root | 2.052 |