Gene detail

Gene detail information of Glyur004334s00044791

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G53990.1	3.00E-91	UDP-Glycosyltransferase superfamily protein
NR	KHN36711.1	0	UDP-glycosyltransferase 79B6 [Glycine soja]
Swissprot	tr\|Q53UH4\|DUSKY_IPONI	9.00E-150	Anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase
trEMBL	tr\|C6TMQ0\|C6TMQ0_SOYBN	0	Putative uncharacterized protein {ECO:0000313\|EMBL:ACU24192.1}

Sequence

Transcript Sequence

>Glyur004334s00044791.1
ATGGATGTTTCTCCTCTGCACATAGCAATGTTTCCATGGTTTGCAATGGGGCACCTAACTCCATATCTCCACCTCTCTAACAAATTAGCAAAGAGAGGACACAGAATCTCCTTCTTCATCCCCGAAAGAACACAATCCAAGTTAGAGCAATTCAACCTCTACCCACACCTCATCACCTTTTACCCCATCAATGTCCCTCACGTTGATGGCCTTCCCCATGGTGCTGAAACCACTTCAGATGTGTCTTACTCTTTAGCTCCACTCATCATGACAGCTTTGGATCTTACTCAGAACCAAATCGAACACCTCCTCATTCAACTAACCCCACAAATTGTTTTCTTCGATTTCGCATATTGGCTACCAAAATTGATACGCCGCTTGGGGATCAAAATCAAATCTTTCCTATACTTAATCGTTAGCCCAGCAACAACATCTTACCATGCATCCCCAGCAAGGATGCACCAGGCCATGGATGTTTCTCCTCTGCACATAGCAATGTTTCCATGGTTTGCAATGGGGCACCTAACTCCATATCTCCACCTCTCTAACAAATTAGCAAAGAGAGGACACAGAATCTCCTTCTTCATCCCCGAAAGAACACAATCCAAGTTAGAGCAATTCAACCTCTACCCACACCTCATCACCTTTTACCCCATCAATGTCCCTCACGTTGATGGCCTTCCCCATGGTGCTGAAACCACTTCAGATGTGTCTTACTCTTTAGCTCCACTCATCATGACAGCTTTGGATCTTACTCAGAACCAAATCGAACACCTCCTCATTCAACTAACCCCACAAATTTCTTTCCTATACTTAATCGTTAGCCCAGCAACAACATCTTACCATGCATCCCCAGCAAGGATGCACCAGGGTAATGATTTGACCGAAATTGACCTTATGCTACCCCCAACAGGGTACCCTGTTTCATCCGTTAAGCTTGATGGCCATGAGGCAAAGTTCCTTGCTTGGAAAAGGAAATGGGAACTCTATAATGGTTTAAGTGCATCAGATGCAATAGGGTTCAAAGGNTGTAGAGAAATTGAAGGGCCTTGTGCTGAGTACATGGAAGAGCAGTTTGGGAAGCCTGTTCTTCTTTCAGGACCTGTCATACCTGAACCACCCAACAGTGCTTTGGAGGAAAATTGGGCTTCTTGGCTTGGTGGATTCAAAGATGGTTCAGTAATTTACTGTGCACTTGGAAGTGAATGGAAATTACCACTAGATCAGTTCCAAGAATTAACTTTGGGGCTTGAGCTAACAGGTTTGCCATTTTTGGCAGTTGTTAAACCTCCTCTTGGATGTGACACAATTGAGGCTGCTATGCCAGAAGGGTTCAAAGAAAGGGTTCAANAGAGAGGGATTGTCCATAGTGGATGGATACAACAACAATTGATTTTGGAACACCCTTCTGTGGGTTGCTTTGTAACACATTGTGGGGCTGATGGTGATCACATCACTAATGCAAGGGTTATGGGTGCGAACTTGAAGGTTGGGGTTGAAGTGAAGAAGGGTGAAGAAGATGGGTTTTTCACAAAGGAAAGTGTGTGCAAAGCAGTGAATATTGTGATGGATGATGAGAATGAGGTTGGCAGAGAAGTCAGGGCAAATCATACAAAAATGAGGAACTTCTTACTAAGCCACAATTTGGAGTCAGTCTATGTTTTGATGCTTTCTGTCAAAAGCTTCAAGATTTNCTCA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold04334	4020	7052	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0008152 metabolic process

molecular_function
GO:0016758 transferase activity, transferring hexosyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--	--

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.295
SRR1783600	control	3.069
SRR1783602	moderate drought stress	2.066
SRR1811619	moderate drought stress	1.749

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.626
DRR006520	Root Summer glycyrrhizin high producing strain	1.888
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.239
DRR006524	Root Summer glycyrrhizin low producing strain	0.235
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.492
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.542

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	7.327
SRR2868004	Drought Stress (root)	6.916
SRR2967015	Control (root)	7.993

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.551
SRR9715740	Leaf	0.148
SRR9715741	Leaf	0.295
SRR9715739	Root	0.150
SRR9715742	Root	0.432
SRR9715743	Root	0.523

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.804
SRR8749028	MeJA induced 9h	1.035
SRR8749029	MeJA induced 9h	0.528
SRR8749030	Uninduced	0.419
SRR8749031	Uninduced	0.879
SRR8749032	Uninduced	0.357

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	5.095
SRR8400027	Control - Root	7.276