Gene detail information of Glyur004334s00044790 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | AES66938.2 | 9.69E-53 | disease resistance protein (TIR-NBS-LRR class), putative [Medicago truncatula] |
| trEMBL | tr|G7IM52|G7IM52_MEDTR | 4.00E-53 | Disease resistance protein (TIR-NBS-LRR class), putative {ECO:0000313|EMBL:AES66938.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04334 | 2282 | 2767 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.423 |
| SRR1783600 | control | 3.418 |
| SRR1783602 | moderate drought stress | 5.747 |
| SRR1811619 | moderate drought stress | 5.254 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.082 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.988 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.280 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.961 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.646 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.140 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.466 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.669 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.045 |
| SRR2868004 | Drought Stress (root) | 5.253 |
| SRR2967015 | Control (root) | 4.299 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.042 |
| SRR9715740 | Leaf | 2.266 |
| SRR9715741 | Leaf | 4.334 |
| SRR9715739 | Root | 1.646 |
| SRR9715742 | Root | 4.131 |
| SRR9715743 | Root | 3.290 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.493 |
| SRR8749028 | MeJA induced 9h | 3.880 |
| SRR8749029 | MeJA induced 9h | 1.977 |
| SRR8749030 | Uninduced | 3.456 |
| SRR8749031 | Uninduced | 1.699 |
| SRR8749032 | Uninduced | 1.091 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.574 |
| SRR8400027 | Control - Root | 7.031 |