Gene detail information of Glyur004308s00045432 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G31950.1 | 9.00E-55 | cytochrome P450, family 82, subfamily C, polypeptide 3 |
| NR | XP_004489343.1 | 5.27E-99 | PREDICTED: cytochrome P450 82A3-like [Cicer arietinum] |
| COG | YP_004596270.1 | 1.00E-20 | Unspecific monooxygenase [Halopiger xanaduensis SH-6] |
| Swissprot | tr|O49859|C82A4_SOYBN | 5.00E-97 | Cytochrome P450 82A4 |
| trEMBL | tr|G7KJF6|G7KJF6_MEDTR | 9.00E-99 | Cytochrome P450 family protein {ECO:0000313|EMBL:AES74584.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04308 | 12126 | 12674 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP82C3 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur004308s00045432.1 | PF00067.17 | p450 | 2 | 156 | 7.80E-46 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.892 |
| SRR1783600 | control | 1.980 |
| SRR1783602 | moderate drought stress | 11.295 |
| SRR1811619 | moderate drought stress | 12.754 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.687 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.318 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.230 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.198 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.452 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.109 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.847 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.843 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.363 |
| SRR2868004 | Drought Stress (root) | 4.745 |
| SRR2967015 | Control (root) | 5.474 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 33.335 |
| SRR9715740 | Leaf | 58.591 |
| SRR9715741 | Leaf | 161.640 |
| SRR9715739 | Root | 3.100 |
| SRR9715742 | Root | 3.953 |
| SRR9715743 | Root | 2.784 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.272 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.396 |
| SRR8749031 | Uninduced | 0.058 |
| SRR8749032 | Uninduced | 0.177 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.142 |
| SRR8400027 | Control - Root | 3.311 |