Gene detail information of Glyur004297s00042062 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003623935.1 | 6.30E-81 | Bowman-Birk type proteinase inhibitor [Medicago truncatula] |
| Swissprot | tr|Q41066|IBB2_PEA | 3.00E-38 | Seed trypsin/chymotrypsin inhibitor TI5-72 (Precursor) |
| trEMBL | tr|B1ACD4|B1ACD4_SOYBN | 3.00E-49 | Putative Bowman-Birk type protease inhibitor {ECO:0000313|EMBL:ACA23206.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04297 | 3654 | 7736 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur004297s00042062.1 | PF00228.15 | Bowman-Birk_leg | 57 | 81 | 2.90E-09 |
| Glyur004297s00042062.1 | PF00228.15 | Bowman-Birk_leg | 83 | 107 | 3.30E-11 |
| Glyur004297s00042062.1 | PF00228.15 | Bowman-Birk_leg | 178 | 202 | 1.90E-09 |
| Glyur004297s00042062.1 | PF00228.15 | Bowman-Birk_leg | 204 | 228 | 9.70E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 826.570 |
| SRR1783600 | control | 858.036 |
| SRR1783602 | moderate drought stress | 347.165 |
| SRR1811619 | moderate drought stress | 359.187 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 245.540 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 240.328 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.591 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.817 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.635 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.673 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.438 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.292 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3089.622 |
| SRR2868004 | Drought Stress (root) | 1576.047 |
| SRR2967015 | Control (root) | 2246.359 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.211 |
| SRR9715740 | Leaf | 0.183 |
| SRR9715741 | Leaf | 2.962 |
| SRR9715739 | Root | 403.088 |
| SRR9715742 | Root | 511.219 |
| SRR9715743 | Root | 463.498 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.018 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 27.582 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 797.746 |
| SRR8400027 | Control - Root | 474.847 |