Gene detail

Database	Orthologs	E value	Annotation
TAIR	AT3G06400.2	2.00E-26	chromatin-remodeling protein 11
NR	XP_006387530.1	1.53E-30	hypothetical protein POPTR_0893s00200g, partial [Populus trichocarpa]
Swissprot	tr\|Q8RWY3\|ISW2_ARATH	2.00E-30	Putative chromatin-remodeling complex ATPase chain
trEMBL	tr\|U7DW60\|U7DW60_POPTR	6.00E-31	Uncharacterized protein {ECO:0000313\|EMBL:ERP46444.1} (Fragment)

Transcript Sequence

Protein Sequence

Scaffold	Start	End	Strand
Scaffold04263	3399	3798	-

Gene family	subfamily
--	--

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

biological_process

GO:0006338 chromatin remodeling

GO:0043044 ATP-dependent chromatin remodeling

cellular_component

GO:0016589 NURF complex

molecular_function

GO:0003676 nucleic acid binding

GO:0003677 DNA binding

GO:0005524 ATP binding

GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

GO:0016887 ATPase activity

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur004263s00037661.1	PF09111.5	SLIDE	11	68	4.70E-16

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	5.515
DRR006520	Root Summer glycyrrhizin high producing strain	5.206
DRR006521	Root Winter glycyrrhizin high producing strain	13.333
DRR006522	Root Winter glycyrrhizin high producing strain	8.686
DRR006523	Root Summer glycyrrhizin low producing strain	0.945
DRR006524	Root Summer glycyrrhizin low producing strain	1.267
DRR006525	Leaf Summer glycyrrhizin high producing strain	5.975
DRR006526	Leaf Summer glycyrrhizin high producing strain	5.980

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	32.029
SRR8400027	Control - Root	42.553