Gene detail information of Glyur004263s00037660 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G06400.1 | 3.00E-10 | chromatin-remodeling protein 11 |
| NR | XP_010941805.1 | 1.43E-09 | PREDICTED: putative chromatin-remodeling complex ATPase chain [Elaeis guineensis] |
| Swissprot | tr|Q8RWY3|ISW2_ARATH | 1.00E-11 | Putative chromatin-remodeling complex ATPase chain |
| trEMBL | tr|A0A078IBG0|A0A078IBG0_BRANA | 5.00E-10 | BnaAnng08460D protein {ECO:0000313|EMBL:CDY47176.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04263 | 1983 | 2628 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.836 |
| SRR1783600 | control | 0.730 |
| SRR1783602 | moderate drought stress | 1.018 |
| SRR1811619 | moderate drought stress | 2.053 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.282 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.850 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.147 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.990 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.169 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.426 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.354 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.976 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.285 |
| SRR2868004 | Drought Stress (root) | 4.072 |
| SRR2967015 | Control (root) | 3.697 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.818 |
| SRR9715740 | Leaf | 5.661 |
| SRR9715741 | Leaf | 7.480 |
| SRR9715739 | Root | 0.247 |
| SRR9715742 | Root | 3.988 |
| SRR9715743 | Root | 3.863 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.224 |
| SRR8749028 | MeJA induced 9h | 3.822 |
| SRR8749029 | MeJA induced 9h | 0.284 |
| SRR8749030 | Uninduced | 0.734 |
| SRR8749031 | Uninduced | 1.003 |
| SRR8749032 | Uninduced | 0.153 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 28.821 |
| SRR8400027 | Control - Root | 44.192 |