Gene detail information of Glyur004262s00044014 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003623935.1 | 2.09E-43 | Bowman-Birk type proteinase inhibitor [Medicago truncatula] |
| Swissprot | tr|Q41066|IBB2_PEA | 2.00E-24 | Seed trypsin/chymotrypsin inhibitor TI5-72 (Precursor) |
| trEMBL | tr|G7L4L3|G7L4L3_MEDTR | 3.00E-32 | Bowman birk trypsin inhibitor {ECO:0000313|EMBL:AES80161.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04262 | 818 | 5238 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur004262s00044014.1 | PF00228.15 | Bowman-Birk_leg | 74 | 98 | 3.00E-05 |
| Glyur004262s00044014.1 | PF00228.15 | Bowman-Birk_leg | 151 | 175 | 1.30E-06 |
| Glyur004262s00044014.1 | PF00228.15 | Bowman-Birk_leg | 209 | 233 | 1.60E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.600 |
| SRR1783600 | control | 0.504 |
| SRR1783602 | moderate drought stress | 1.282 |
| SRR1811619 | moderate drought stress | 1.272 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.148 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.007 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.156 |
| SRR2868004 | Drought Stress (root) | 15.646 |
| SRR2967015 | Control (root) | 15.936 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.751 |
| SRR9715740 | Leaf | 0.071 |
| SRR9715741 | Leaf | 2.861 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.040 |
| SRR9715743 | Root | 0.042 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.616 |
| SRR8749028 | MeJA induced 9h | 15.588 |
| SRR8749029 | MeJA induced 9h | 12.409 |
| SRR8749030 | Uninduced | 157.209 |
| SRR8749031 | Uninduced | 242.497 |
| SRR8749032 | Uninduced | 100.306 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.226 |
| SRR8400027 | Control - Root | 0.246 |