Gene detail information of Glyur004237s00041196 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G48500.1 | 3.00E-21 | |
| NR | XP_007134251.1 | 2.79E-50 | hypothetical protein PHAVU_010G031300g [Phaseolus vulgaris] |
| trEMBL | tr|V7ALX6|V7ALX6_PHAVU | 1.00E-50 | Uncharacterized protein {ECO:0000313|EMBL:ESW06245.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04237 | 14037 | 16357 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.527 |
| SRR1783600 | control | 13.606 |
| SRR1783602 | moderate drought stress | 8.009 |
| SRR1811619 | moderate drought stress | 7.582 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.276 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.530 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.177 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.311 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.472 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.321 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.989 |
| SRR2868004 | Drought Stress (root) | 3.644 |
| SRR2967015 | Control (root) | 5.676 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.467 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.163 |
| SRR9715739 | Root | 2.449 |
| SRR9715742 | Root | 1.980 |
| SRR9715743 | Root | 1.588 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.103 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.111 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.483 |
| SRR8400027 | Control - Root | 8.406 |