Gene detail

Gene detail information of Glyur004220s00039042.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G66910.1	4.00E-38	Protein kinase superfamily protein
NR	KEH27016.1	1.48E-63	receptor-like kinase [Medicago truncatula]
COG	YP_001958461.1	2.00E-08	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|D7SFH9\|GPDL2_ARATH	5.00E-41	Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 {ECO:0000305} (Precursor)
trEMBL	tr\|A0A072UC43\|A0A072UC43_MEDTR	6.00E-64	Receptor-like kinase {ECO:0000313\|EMBL:KEH27016.1}

Sequence

Transcript Sequence

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold04220	2396	6639	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.9.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0004713 protein tyrosine kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur004220s00039042.1	PF07714.12	Pkinase_Tyr	29	123	2.40E-18

Expression pattern

SRA Experiment	Description	TPM
SRR1783599	control	0.149
SRR1783600	control	0.091
SRR1783602	moderate drought stress	0.212
SRR1811619	moderate drought stress	0.482

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.078
DRR006520	Root Summer glycyrrhizin high producing strain	0.087
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.100
DRR006523	Root Summer glycyrrhizin low producing strain	0.606
DRR006524	Root Summer glycyrrhizin low producing strain	0.151
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.447
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.519

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.022
SRR2868004	Drought Stress (root)	0.111
SRR2967015	Control (root)	0.221

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.294
SRR9715740	Leaf	0.000
SRR9715741	Leaf	0.000
SRR9715739	Root	0.000
SRR9715742	Root	0.000
SRR9715743	Root	0.067

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.037
SRR8400027	Control - Root	0.416