Gene detail information of Glyur004199s00038359 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G78280.1 | 2.00E-45 | transferases, transferring glycosyl groups |
| NR | XP_004501697.1 | 5.97E-93 | PREDICTED: F-box protein At1g78280-like [Cicer arietinum] |
| Swissprot | tr|Q9M9E8|FB92_ARATH | 1.00E-53 | F-box protein At1g78280 |
| trEMBL | tr|I1K9W1|I1K9W1_SOYBN | 8.00E-90 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G10660.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04199 | 4420 | 7331 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.766 |
| SRR1783600 | control | 0.650 |
| SRR1783602 | moderate drought stress | 0.492 |
| SRR1811619 | moderate drought stress | 0.586 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.122 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.199 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.496 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.822 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.352 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.739 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.147 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.035 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.470 |
| SRR2868004 | Drought Stress (root) | 3.763 |
| SRR2967015 | Control (root) | 2.740 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.882 |
| SRR9715740 | Leaf | 0.125 |
| SRR9715741 | Leaf | 1.053 |
| SRR9715739 | Root | 0.229 |
| SRR9715742 | Root | 0.562 |
| SRR9715743 | Root | 0.949 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.016 |
| SRR8749028 | MeJA induced 9h | 0.020 |
| SRR8749029 | MeJA induced 9h | 0.013 |
| SRR8749030 | Uninduced | 0.013 |
| SRR8749031 | Uninduced | 0.061 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.259 |
| SRR8400027 | Control - Root | 0.288 |