Gene detail information of Glyur004161s00039873 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G24880.1 | 4.00E-139 | |
| NR | KEH34967.1 | 0 | plant/F13M23-20 protein [Medicago truncatula] |
| trEMBL | tr|A0A072UZJ7|A0A072UZJ7_MEDTR | 0 | Plant/F13M23-20 protein {ECO:0000313|EMBL:KEH34967.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04161 | 146 | 5502 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.402 |
| SRR1783600 | control | 19.633 |
| SRR1783602 | moderate drought stress | 13.131 |
| SRR1811619 | moderate drought stress | 12.551 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.255 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.528 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.575 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.969 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.855 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.684 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.168 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.043 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.224 |
| SRR2868004 | Drought Stress (root) | 11.913 |
| SRR2967015 | Control (root) | 14.655 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.949 |
| SRR9715740 | Leaf | 1.731 |
| SRR9715741 | Leaf | 2.585 |
| SRR9715739 | Root | 3.046 |
| SRR9715742 | Root | 7.367 |
| SRR9715743 | Root | 6.313 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.464 |
| SRR8749028 | MeJA induced 9h | 8.446 |
| SRR8749029 | MeJA induced 9h | 3.427 |
| SRR8749030 | Uninduced | 4.213 |
| SRR8749031 | Uninduced | 2.523 |
| SRR8749032 | Uninduced | 1.825 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.631 |
| SRR8400027 | Control - Root | 10.832 |