Gene detail information of Glyur004138s00043815 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G05200.1 | 9.00E-22 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25 |
| NR | XP_003638022.1 | 9.94E-71 | Cysteine-rich receptor-like protein kinase [Medicago truncatula] |
| Swissprot | tr|Q9M0X5|CRK25_ARATH | 3.00E-23 | Cysteine-rich receptor-like protein kinase 25 (Precursor) |
| trEMBL | tr|G8A122|G8A122_MEDTR | 4.00E-71 | Cysteine-rich receptor-like protein kinase {ECO:0000313|EMBL:AES85160.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04138 | 3958 | 9081 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur004138s00043815.1 | PF01657.12 | Stress-antifung | 31 | 134 | 1.30E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.049 |
| SRR1783600 | control | 0.078 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.114 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.071 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.311 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.222 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.116 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.229 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.732 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.070 |
| SRR2868004 | Drought Stress (root) | 0.280 |
| SRR2967015 | Control (root) | 0.681 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.045 |
| SRR9715740 | Leaf | 25.240 |
| SRR9715741 | Leaf | 1.791 |
| SRR9715739 | Root | 0.263 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.055 |
| SRR8749028 | MeJA induced 9h | 0.170 |
| SRR8749029 | MeJA induced 9h | 0.032 |
| SRR8749030 | Uninduced | 0.566 |
| SRR8749031 | Uninduced | 1.312 |
| SRR8749032 | Uninduced | 0.441 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.113 |