Gene detail information of Glyur004113s00043876 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G30820.3 | 8.00E-16 | cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related |
| NR | XP_007151419.1 | 1.07E-43 | hypothetical protein PHAVU_004G044600g [Phaseolus vulgaris] |
| trEMBL | tr|V7C211|V7C211_PHAVU | 4.00E-44 | Uncharacterized protein {ECO:0000313|EMBL:ESW23413.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04113 | 1645 | 1911 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.616 |
| SRR1783600 | control | 1.372 |
| SRR1783602 | moderate drought stress | 2.313 |
| SRR1811619 | moderate drought stress | 2.092 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.605 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.609 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.919 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.427 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.208 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.621 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.697 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.078 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.128 |
| SRR2868004 | Drought Stress (root) | 0.555 |
| SRR2967015 | Control (root) | 0.180 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.532 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.331 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.381 |
| SRR8749028 | MeJA induced 9h | 4.609 |
| SRR8749029 | MeJA induced 9h | 2.312 |
| SRR8749030 | Uninduced | 6.278 |
| SRR8749031 | Uninduced | 4.679 |
| SRR8749032 | Uninduced | 5.810 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.025 |
| SRR8400027 | Control - Root | 0.170 |