Gene detail information of Glyur004091s00045351 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G24130.1 | 1.00E-47 | Protein of unknown function, DUF538 |
| NR | ACJ83938.1 | 7.95E-76 | unknown [Medicago truncatula] |
| trEMBL | tr|B7FGQ9|B7FGQ9_MEDTR | 3.00E-76 | Uncharacterized protein {ECO:0000313|EMBL:AFK36807.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04091 | 14217 | 14697 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur004091s00045351.1 | PF04398.7 | DUF538 | 22 | 124 | 4.30E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.018 |
| SRR1783600 | control | 19.457 |
| SRR1783602 | moderate drought stress | 17.431 |
| SRR1811619 | moderate drought stress | 17.570 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.179 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.411 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.183 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.365 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.182 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.375 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.097 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.200 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.927 |
| SRR2868004 | Drought Stress (root) | 3.361 |
| SRR2967015 | Control (root) | 10.012 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.135 |
| SRR9715740 | Leaf | 1.766 |
| SRR9715741 | Leaf | 0.991 |
| SRR9715739 | Root | 9.802 |
| SRR9715742 | Root | 5.085 |
| SRR9715743 | Root | 7.398 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.058 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.129 |
| SRR8749031 | Uninduced | 0.167 |
| SRR8749032 | Uninduced | 0.062 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 82.504 |
| SRR8400027 | Control - Root | 92.377 |