Gene detail information of Glyur004081s00043514 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G23530.1 | 8.00E-11 | |
| NR | KEH20023.1 | 9.93E-43 | transmembrane protein, putative [Medicago truncatula] |
| trEMBL | tr|A0A072TT50|A0A072TT50_MEDTR | 4.00E-43 | Transmembrane protein, putative {ECO:0000313|EMBL:KEH20023.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04081 | 6829 | 7815 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.668 |
| SRR1783600 | control | 9.764 |
| SRR1783602 | moderate drought stress | 6.402 |
| SRR1811619 | moderate drought stress | 6.282 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.066 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.562 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.113 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.918 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.029 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 21.384 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.731 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.926 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.885 |
| SRR2868004 | Drought Stress (root) | 16.077 |
| SRR2967015 | Control (root) | 15.053 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.821 |
| SRR9715740 | Leaf | 4.764 |
| SRR9715741 | Leaf | 8.019 |
| SRR9715739 | Root | 0.573 |
| SRR9715742 | Root | 7.835 |
| SRR9715743 | Root | 4.819 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.269 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.345 |
| SRR8400027 | Control - Root | 7.771 |