Gene detail information of Glyur004034s00034231 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G11780.1 | 2.00E-37 | |
| NR | XP_006572921.1 | 0 | PREDICTED: uncharacterized protein LOC100790501 [Glycine max] |
| trEMBL | tr|I1J4C7|I1J4C7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G00670.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04034 | 4789 | 7406 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.994 |
| SRR1783600 | control | 9.057 |
| SRR1783602 | moderate drought stress | 9.511 |
| SRR1811619 | moderate drought stress | 9.405 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.356 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.706 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.605 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.301 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.879 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.777 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.209 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.247 |
| SRR2868004 | Drought Stress (root) | 17.047 |
| SRR2967015 | Control (root) | 18.283 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.431 |
| SRR9715740 | Leaf | 10.560 |
| SRR9715741 | Leaf | 9.747 |
| SRR9715739 | Root | 6.240 |
| SRR9715742 | Root | 19.616 |
| SRR9715743 | Root | 18.185 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 34.050 |
| SRR8749028 | MeJA induced 9h | 13.398 |
| SRR8749029 | MeJA induced 9h | 13.073 |
| SRR8749030 | Uninduced | 3.149 |
| SRR8749031 | Uninduced | 1.100 |
| SRR8749032 | Uninduced | 2.342 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.194 |
| SRR8400027 | Control - Root | 16.279 |