Gene detail information of Glyur004026s00039329 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G67080.1 | 1.00E-64 | abscisic acid (aba)-deficient 4 |
| NR | KHN07529.1 | 2.25E-125 | hypothetical protein glysoja_033482 [Glycine soja] |
| trEMBL | tr|I1N6R7|I1N6R7_SOYBN | 8.00E-126 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G06540.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04026 | 8871 | 12131 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur004026s00039329.1 | PF14108.1 | DUF4281 | 88 | 233 | 2.90E-40 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.228 |
| SRR1783600 | control | 5.555 |
| SRR1783602 | moderate drought stress | 1.649 |
| SRR1811619 | moderate drought stress | 1.568 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.534 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.419 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.289 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.110 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.672 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.777 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.638 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.550 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.091 |
| SRR2868004 | Drought Stress (root) | 17.586 |
| SRR2967015 | Control (root) | 14.520 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.678 |
| SRR9715740 | Leaf | 2.444 |
| SRR9715741 | Leaf | 1.912 |
| SRR9715739 | Root | 0.064 |
| SRR9715742 | Root | 0.565 |
| SRR9715743 | Root | 0.110 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.460 |
| SRR8749028 | MeJA induced 9h | 5.325 |
| SRR8749029 | MeJA induced 9h | 7.948 |
| SRR8749030 | Uninduced | 2.960 |
| SRR8749031 | Uninduced | 1.798 |
| SRR8749032 | Uninduced | 2.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.229 |
| SRR8400027 | Control - Root | 2.039 |