Gene detail information of Glyur004003s00042378 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G21340.1 | 2.00E-12 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | AFK38358.1 | 1.45E-22 | unknown [Lotus japonicus] |
| Swissprot | tr|Q8VZ22|BH103_ARATH | 3.00E-14 | Transcription factor bHLH103 |
| trEMBL | tr|I3SDL6|I3SDL6_LOTJA | 5.00E-23 | Uncharacterized protein {ECO:0000313|EMBL:AFK38358.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04003 | 8965 | 14625 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.607 |
| SRR1783600 | control | 2.548 |
| SRR1783602 | moderate drought stress | 3.446 |
| SRR1811619 | moderate drought stress | 3.326 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.950 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.593 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.704 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.512 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.075 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.977 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.084 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.103 |
| SRR2868004 | Drought Stress (root) | 0.009 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.201 |
| SRR9715740 | Leaf | 0.025 |
| SRR9715741 | Leaf | 7.035 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 1.782 |
| SRR9715743 | Root | 1.145 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.006 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.009 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.844 |
| SRR8400027 | Control - Root | 7.099 |