Gene detail information of Glyur003997s00043751 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G16520.3 | 3.00E-47 | UDP-glucosyl transferase 88A1 |
| NR | XP_003533971.1 | 4.86E-77 | PREDICTED: UDP-glycosyltransferase 88A1-like [Glycine max] |
| COG | YP_007204364.1 | 2.00E-06 | UDP-glucuronosyltransferase [Singulisphaera acidiphila DSM 18658] |
| Swissprot | tr|Q9LK73|U88A1_ARATH | 5.00E-61 | UDP-glycosyltransferase 88A1 |
| trEMBL | tr|I1L2Z1|I1L2Z1_SOYBN | 2.00E-77 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G23750.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03997 | 9538 | 10047 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003997s00043751.1 | PF00201.13 | UDPGT | 40 | 108 | 1.80E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.938 |
| SRR1783600 | control | 12.265 |
| SRR1783602 | moderate drought stress | 2.598 |
| SRR1811619 | moderate drought stress | 2.385 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.052 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.528 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.109 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.444 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.553 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.622 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.960 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.494 |
| SRR2868004 | Drought Stress (root) | 11.365 |
| SRR2967015 | Control (root) | 1.043 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.159 |
| SRR9715740 | Leaf | 13.339 |
| SRR9715741 | Leaf | 6.954 |
| SRR9715739 | Root | 29.425 |
| SRR9715742 | Root | 11.797 |
| SRR9715743 | Root | 13.637 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.132 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.106 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 39.226 |
| SRR8400027 | Control - Root | 25.153 |