Gene detail information of Glyur003994s00042986 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | BAC15846.1 | 1.39E-13 | hypothetical protein [Oryza sativa Japonica Group] |
| trEMBL | tr|Q8H5U4|Q8H5U4_ORYSJ | 5.00E-14 | Putative uncharacterized protein OJ1123_C12.115 {ECO:0000313|EMBL:BAC15846.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03994 | 12137 | 12574 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.553 |
| SRR1783600 | control | 2.985 |
| SRR1783602 | moderate drought stress | 2.166 |
| SRR1811619 | moderate drought stress | 2.421 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.433 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.238 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 323.675 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 322.583 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.845 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.065 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.425 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.165 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.179 |
| SRR2868004 | Drought Stress (root) | 0.160 |
| SRR2967015 | Control (root) | 0.389 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.689 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 1.377 |
| SRR9715739 | Root | 5.643 |
| SRR9715742 | Root | 9.338 |
| SRR9715743 | Root | 15.469 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.850 |
| SRR8749028 | MeJA induced 9h | 25.175 |
| SRR8749029 | MeJA induced 9h | 143.308 |
| SRR8749030 | Uninduced | 91.256 |
| SRR8749031 | Uninduced | 101.919 |
| SRR8749032 | Uninduced | 339.193 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.482 |
| SRR8400027 | Control - Root | 0.247 |