Gene detail information of Glyur003988s00044251 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G21730.1 | 1.00E-04 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| NR | XP_006439234.1 | 3.16E-06 | hypothetical protein CICLE_v10019043mg [Citrus clementina] |
| trEMBL | tr|V4TLD4|V4TLD4_9ROSI | 1.00E-05 | Uncharacterized protein {ECO:0000313|EMBL:ESR52475.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03988 | 1343 | 4592 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.372 |
| SRR1783600 | control | 8.584 |
| SRR1783602 | moderate drought stress | 9.399 |
| SRR1811619 | moderate drought stress | 8.512 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 32.915 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 34.336 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 54.528 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 52.934 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.544 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.889 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.120 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.557 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.737 |
| SRR2868004 | Drought Stress (root) | 15.506 |
| SRR2967015 | Control (root) | 13.678 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.920 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 2.957 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 3.073 |
| SRR9715743 | Root | 3.141 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 29.895 |
| SRR8749028 | MeJA induced 9h | 18.988 |
| SRR8749029 | MeJA induced 9h | 27.883 |
| SRR8749030 | Uninduced | 12.760 |
| SRR8749031 | Uninduced | 12.711 |
| SRR8749032 | Uninduced | 10.535 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.045 |
| SRR8400027 | Control - Root | 8.367 |