Gene detail information of Glyur003963s00043021 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G31720.1 | 3.00E-14 | Protein of unknown function (DUF1218) |
| NR | XP_003629015.1 | 7.47E-44 | hypothetical protein MTR_8g072220 [Medicago truncatula] |
| trEMBL | tr|G7L7T9|G7L7T9_MEDTR | 3.00E-44 | Transmembrane protein, putative {ECO:0000313|EMBL:AET03491.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03963 | 3518 | 4941 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003963s00043021.1 | PF06749.7 | DUF1218 | 3 | 63 | 5.80E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.115 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.104 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.214 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.215 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.161 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.057 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.190 |
| SRR2868004 | Drought Stress (root) | 5.220 |
| SRR2967015 | Control (root) | 3.482 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.124 |
| SRR9715740 | Leaf | 7.169 |
| SRR9715741 | Leaf | 13.834 |
| SRR9715739 | Root | 0.242 |
| SRR9715742 | Root | 1.180 |
| SRR9715743 | Root | 0.859 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.635 |
| SRR8749028 | MeJA induced 9h | 0.654 |
| SRR8749029 | MeJA induced 9h | 0.277 |
| SRR8749030 | Uninduced | 2.029 |
| SRR8749031 | Uninduced | 1.898 |
| SRR8749032 | Uninduced | 1.422 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.922 |
| SRR8400027 | Control - Root | 1.607 |