Gene detail

Gene detail information of Glyur003947s00041435

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G27220.1	5.00E-70	NB-ARC domain-containing disease resistance protein
NR	KEH38455.1	0	disease resistance protein (CC-NBS-LRR class) family protein [Medicago truncatula]
COG	YP_002463148.1	6.00E-13	NB-ARC domain-containing protein [Chloroflexus aggregans DSM 9485]
Swissprot	tr\|O81825\|DRL28_ARATH	3.00E-79	Probable disease resistance protein At4g27220
trEMBL	tr\|A0A072VJZ9\|A0A072VJZ9_MEDTR	0	Disease resistance protein (CC-NBS-LRR class) family protein {ECO:0000313\|EMBL:KEH38455.1}

Sequence

Transcript Sequence

>Glyur003947s00041435.1
ATGGGGTGGCAAATGACAACGAATATTGCTTCTAAAATTGCTGAATATGTGGTTCCACCTGTTATACGTCAATTTGGTTACATACTCCACTACGAGGACAACCTTGAAAGGCTGGAAACCGAGGTCCAAAAGCTGGAGGGAACCAAACTTAGTGTGCAACACTCAGTTGATGAGGCTGAAAAAAATGGAGAAGTGATTGAAGATGTTGTCCAGGACTGGCTGAAGAAAGTGAAAAGAACTGTTGCTGAGGCAAAGACAATTATTGACAATGAAGGCCATGCAAATGCTGGATGTGGCATGGGGCCCATTTGCAATCTGTGGACAAGGCATCAGCTGAGCAGTAAGGCAAAAAAGATGACACAAGAGATTTCTGAAGTCTTGGCAGATAGAAAATTTGACAGAATTTCTTACCGTGCAGCTTCTCAAGTGTCAATCATGCCATCTGGTAGAGGTTATGAGGTCCTGGACTCCAGAACCTCAATGCTGAATCAGATTACGCTGGCATTGAAGGATCCTAACCTCTTCATTATTGGGGTGTATGGGATGGGTGGTGTGGGTAAGACATCATTGGTGGAAGAGTTAACTTGGCAAGCAGAGAAAGGTGGGTCATTTGGTGCTGTAGTTAAGGCTGATATAACTGATTCTCCAAATGTGGAAAAAATTCAAGGCCAAATTGCTGATGCCTTGGATCTGAAATTCAATAAGGAGACAAAACAAGGAAGAGCGAGACAATTACGTGAAAGGATAAGCAAGGAGAAGAGTATTCTTGTTATTCTGGATGACATTTGGGGAAAACTTGATTTGACAGAAGTGGGGATTCCTTTTGGTGATGCCCACAGAGGATGCAAGCTGGTGGTGACATCCAGATATCTTAATGTGCTGAGCTCTGAGATGGGCACTCGAAAAGAATTTAGACTTGAAGTTTTACTTGAGGAGGATAGTTGGAAATTGTTTGAGAAAATGGCAGGTGATGTTGTTCAAGAATTCAATATAAAGCCAATTGCGGTAGAAGTGGCCAGATGTTGTGCTGGTTTGCCCCTTTTGTTAGTTACCGTGGCAAAGGCTTTGAGAAAAAAAGATGTCTTTTATTGGAAAAGTACGTTGAATGAGTTGAAGAGATTTGATCAAGAAGGGCTGCATGAAAAAGTCTACTCTACTTTGGAGTTGAGTTATAATTGTTTAGAGAGTGACGAACTGAAGTCACTATTCTTATTCATTGGCTCATTTGGACTAGATTACCTAGTAACTGGACAACTGTTTCAATGTTTTTGGGGGATGGGCTTACATAGATACGCTCACACATTGACAGATGCAAGAAACAAATTCTACAAATTGATAAACGACCTCAGGGCCTCTTCCTTGTTACTTGAGTCTGAAACTAATTTGGTTAGAATGCATGATTTTGTTAGAGATGTGGCTAAATCAATTGCATCTAGGGCTCAACCAACCTATGGTGTGCAAAGGTTCACTGAAATAAAACAATGGCCAGAGATAGATCAGCTTCAAAAGTGTCATTCCATTATCTTGCCTTGGTCTTATATTCATGAGCTTCCTGAGAAGTTGGAGTGCCCAGAGTTGAAGCTACTTCTACTACATACTATAGGTGACCATTTGAAAGTCCCTGATGACTTTTTCTCTGGGATGAGAGAAGTAAAGGTTCTTGATCTATATGGAATGATGTTTACTCCTTCCCTACCTCCATCTCTTCATCTCTTGACAAACCTTCGATCCCTGTGTCTAGCTGGATGTGTGTTGGAAGACATATCAATAGTTGTAGAACTAAAAAGTTTAGAGATCCTAAGCCTTGAAAGATCTGATATTAAAGAGCTCCCAAAAGATATTGGACAACTAGCTAATCTCCGAGTCCTGAATTTTACCAACTGCTCTGGACTCAGATCCATTCCTGCAAATCTTATTTCAAGCTTAACATGCTTGGAAGAGTTGTATATGGGGAACTGCTATATCCAATGGGATGTCAAAGGAAGCAAAGATCAAAGCAATAATGCAAGTCTGGATGAGCTAAGGAATCTGTCCCAGCTAACAACTTTGGACATAATGCTTCAAGATACTTCAGTTTTGCCAAGGGACTTGCAGGTCTTTGCAAAGCTTGAAAGATACAACATTTTTATTGGTGACAAGTGGAAATGGTCTTTAGAATGGTCTGGCGGTGCTTCTGAGTCTTCAAGAATACTTAAGCTCGAAGAGAGTAAGAGTACAAGCATTCTTTTGGATCATGGGTTTAGCTTCTTGTTGAATTCAGCTGAGGACATGTGCTTAGCCGGATTACAGTGTGTTAGAGATGTCCTTTATGTGTTGAACAGGAAAGGTTTTCCACAATTAAAGCATTTGTGCATTCAACACAGTGCTGAATTGAAGTACATCGTTAACTCAATGGGGCGTGTTTATCCCTATCCTGCTTTCCCTAACTTAGAGACTTTGGCTCTTCAAAATCTAGNTAATTTGGAAGATGTATGCCATGGTCCAATTCCGATACATTCTTTTACCAAACTTAAAAAAATTGAAGTCAAAGGTTGTGATGAGTTGAAGAATGTGTTGTGGTATTCCCTTATTAGAGACCTTCCTCGACTTCTTGAAATAAAAATTTCTGAATGCAAATTGATGACACAGGTCATAGCTGAGCAAACACTCGCAGGTGACAAAGAAATGGACATAATCATGTTTCCTAAGTTGCAGTCTCTTACACTGGAGTGTTTACCTAGCCTAGTTAGTTTCTGTTCCTTGCCATTGACAGCTAATATGGGCTCTGTGGCACTAATTGATCAGAAGGTAGCGATGCCTCATCTTGAAACCTTGAAGCTGTCAAAGATCAATTCTTGGAAATTATGGGATGACACACTTTCAGGTCATTCTTGCGTTCAAAGCTTGACGAGTCTGACAATTGACAATTGTGGCAGCATAGCATATGTATTCTCATCCCTGGTGGCTAGAGAACTTGTAAACCTGCAATATCTTAAGATTAGTAATTGTCATATGTTGGAAGAGATATTTGTCTTAGATGGAAACTTGGGTAATAGTGCTTCAGCTAACAGACCACTCTCTGATGAGGAGGTTATATTTCCAAACTTGGAGACATTGGTAATCTCCCACATGGATCACNTGAAGTCAGTATGGCACAACCAACTAGCTCCAAATTCTTTCTGCAAACTGAAGAAGGTGGAAACTAAATTCTGCAATCAGTTATCTAATAGTCTGGAAACAATGATTGTAACCAATTGTCCAGCACTGGAATTTGTATTTGAAATACAAGATCTAAGAACAGGAGTTGATAGTCAGGCGNGGCTACAAATGCAATTGAGAACTCTTGCTTTGGAANATTTACCAATGCTGAAACACATATGGAGTGGGAATCCTTATGGAAGCTTCAGGTTTCAAAAACTCTCTCAATTGAAAGTCACTGAATGTGAAAGCCTCAATCATGTTCTTCCACTCTCTGTGGCAGAAGATCTTCCACATCTCCAAGTGCTTTATATAGAAAAATGTGTCGTAGAGACTATTGTAGCACAGGATGAAATGTCTCACACAGCTCCAATACTTGTTATCCCAGAATTAACATCTTTGAGTTTTCGAGAGTTGGAGAAACTTAGAAGCTTTTACCCAGCATTACATACCATGGATTGTCCCGTTTTAAGAGATTTGGATGTGCTTCATTGTGATCAGCTACAACTTTTCACGCCAAAGTCTTTAAACTGCCAAGAGATTGTTATCCCCAACATAAGGGAGCTTATTCTGAGCAGCAAGGATGTCACAATGTTATGCAATGGTCAACTTCATGATGAGCTTATTTACACAGTAAAAGCTCTTCGCCTGAGATGTTTTCATGATGAGTCCGCCAAATTTCCATCAGGTTTCCTCCAAAAATTTATCAATCTTGAAAATCTTAAGGTGACGTGCAGCACCTTAACAGAGATTTTCTGGAGTGGAAGCTTTGGCAGTGGACATTCTGAAACAACTATGAAGTTGAGAAGCTTAATACTTGTTAAATTATATAGCCTCGAGTTTATATTTAAAGACAAATATGAGATGCAGCCCATTCTTCAAAATCTCGAGTCATTGAAAGTTTTTCAATGTCCTAGACTGAAGACTATAGTTCCATCCCCGATGCCATTTCAGAATTTAGAGGAGTTATGGGTGACAGGTTGTGCTGGATTGGAAAATATATTAACACCATCATCAGCAACTAGTTTACCTAAACTTCGAGAGTTGCGCATACATGATTGTGAAAAGATCGAAAAAATTGTTGCAAGTGATGATGACAGTGATGCTGGTGAGATTGCTTTTATGAAATTGAAGCGTTTGCAATTGGTGAACTTACCATGGCTAAGAAGCTTTTACGAGGGAAGTTACAGCCTCAAATTACCACTGCTGCAAGGTTTGTATATAATAGATTGTCCAGTGATGGAAACTTTCTCATATGGAGTGTTGAACGCACCAAAGCTCAGAGCAGTACGTGTAAATCCAAAAAATGAATGGCAATGGAACGTTGACCTTAATACTACTATAAGAAAAATGTTTGACGAAACGGTAATGTATACAAATTTGATTATCTCCAAACGTAATTTAAGTCTTACG

Protein Sequence

>Glyur003947s00041435.1
MGWQMTTNIASKIAEYVVPPVIRQFGYILHYEDNLERLETEVQKLEGTKLSVQHSVDEAEKNGEVIEDVVQDWLKKVKRTVAEAKTIIDNEGHANAGCGMGPICNLWTRHQLSSKAKKMTQEISEVLADRKFDRISYRAASQVSIMPSGRGYEVLDSRTSMLNQITLALKDPNLFIIGVYGMGGVGKTSLVEELTWQAEKGGSFGAVVKADITDSPNVEKIQGQIADALDLKFNKETKQGRARQLRERISKEKSILVILDDIWGKLDLTEVGIPFGDAHRGCKLVVTSRYLNVLSSEMGTRKEFRLEVLLEEDSWKLFEKMAGDVVQEFNIKPIAVEVARCCAGLPLLLVTVAKALRKKDVFYWKSTLNELKRFDQEGLHEKVYSTLELSYNCLESDELKSLFLFIGSFGLDYLVTGQLFQCFWGMGLHRYAHTLTDARNKFYKLINDLRASSLLLESETNLVRMHDFVRDVAKSIASRAQPTYGVQRFTEIKQWPEIDQLQKCHSIILPWSYIHELPEKLECPELKLLLLHTIGDHLKVPDDFFSGMREVKVLDLYGMMFTPSLPPSLHLLTNLRSLCLAGCVLEDISIVVELKSLEILSLERSDIKELPKDIGQLANLRVLNFTNCSGLRSIPANLISSLTCLEELYMGNCYIQWDVKGSKDQSNNASLDELRNLSQLTTLDIMLQDTSVLPRDLQVFAKLERYNIFIGDKWKWSLEWSGGASESSRILKLEESKSTSILLDHGFSFLLNSAEDMCLAGLQCVRDVLYVLNRKGFPQLKHLCIQHSAELKYIVNSMGRVYPYPAFPNLETLALQNLXNLEDVCHGPIPIHSFTKLKKIEVKGCDELKNVLWYSLIRDLPRLLEIKISECKLMTQVIAEQTLAGDKEMDIIMFPKLQSLTLECLPSLVSFCSLPLTANMGSVALIDQKVAMPHLETLKLSKINSWKLWDDTLSGHSCVQSLTSLTIDNCGSIAYVFSSLVARELVNLQYLKISNCHMLEEIFVLDGNLGNSASANRPLSDEEVIFPNLETLVISHMDHXKSVWHNQLAPNSFCKLKKVETKFCNQLSNSLETMIVTNCPALEFVFEIQDLRTGVDSQAXLQMQLRTLALEXLPMLKHIWSGNPYGSFRFQKLSQLKVTECESLNHVLPLSVAEDLPHLQVLYIEKCVVETIVAQDEMSHTAPILVIPELTSLSFRELEKLRSFYPALHTMDCPVLRDLDVLHCDQLQLFTPKSLNCQEIVIPNIRELILSSKDVTMLCNGQLHDELIYTVKALRLRCFHDESAKFPSGFLQKFINLENLKVTCSTLTEIFWSGSFGSGHSETTMKLRSLILVKLYSLEFIFKDKYEMQPILQNLESLKVFQCPRLKTIVPSPMPFQNLEELWVTGCAGLENILTPSSATSLPKLRELRIHDCEKIEKIVASDDDSDAGEIAFMKLKRLQLVNLPWLRSFYEGSYSLKLPLLQGLYIIDCPVMETFSYGVLNAPKLRAVRVNPKNEWQWNVDLNTTIRKMFDETVMYTNLIISKRNLSLT

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold03947	4850	10663	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0043531 ADP binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur003947s00041435.1	PF00931.17	NB-ARC	161	415	2.00E-47

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.657
SRR1783600	control	1.582
SRR1783602	moderate drought stress	9.670
SRR1811619	moderate drought stress	9.959

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.861
DRR006520	Root Summer glycyrrhizin high producing strain	1.860
DRR006521	Root Winter glycyrrhizin high producing strain	0.097
DRR006522	Root Winter glycyrrhizin high producing strain	0.141
DRR006523	Root Summer glycyrrhizin low producing strain	1.661
DRR006524	Root Summer glycyrrhizin low producing strain	1.466
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.993
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.965

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	12.020
SRR2868004	Drought Stress (root)	18.387
SRR2967015	Control (root)	13.178

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.667
SRR9715740	Leaf	0.000
SRR9715741	Leaf	1.357
SRR9715739	Root	0.035
SRR9715742	Root	1.689
SRR9715743	Root	0.988

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.529
SRR8749028	MeJA induced 9h	1.717
SRR8749029	MeJA induced 9h	0.470
SRR8749030	Uninduced	0.650
SRR8749031	Uninduced	0.146
SRR8749032	Uninduced	0.248

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	17.412
SRR8400027	Control - Root	6.025