Gene detail information of Glyur003911s00045677 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G51670.1 | 3.00E-115 | Protein of unknown function (DUF668) |
| NR | XP_007152396.1 | 0 | hypothetical protein PHAVU_004G126500g [Phaseolus vulgaris] |
| trEMBL | tr|V7C533|V7C533_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW24390.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03911 | 7506 | 9050 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003911s00045677.1 | PF11961.3 | DUF3475 | 44 | 99 | 4.00E-20 |
| Glyur003911s00045677.1 | PF05003.7 | DUF668 | 338 | 427 | 1.40E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.380 |
| SRR1783600 | control | 18.865 |
| SRR1783602 | moderate drought stress | 18.898 |
| SRR1811619 | moderate drought stress | 19.101 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 27.983 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 27.699 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.776 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.439 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.757 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.663 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.412 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.637 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.424 |
| SRR2868004 | Drought Stress (root) | 21.074 |
| SRR2967015 | Control (root) | 17.051 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.898 |
| SRR9715740 | Leaf | 3.092 |
| SRR9715741 | Leaf | 2.288 |
| SRR9715739 | Root | 31.874 |
| SRR9715742 | Root | 33.338 |
| SRR9715743 | Root | 29.158 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.774 |
| SRR8749028 | MeJA induced 9h | 8.936 |
| SRR8749029 | MeJA induced 9h | 3.726 |
| SRR8749030 | Uninduced | 3.811 |
| SRR8749031 | Uninduced | 3.331 |
| SRR8749032 | Uninduced | 4.290 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.654 |
| SRR8400027 | Control - Root | 20.230 |