Gene detail information of Glyur003910s00047634 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN15600.1 | 5.07E-60 | TMV resistance protein N [Glycine soja] |
| trEMBL | tr|C6ZS22|C6ZS22_SOYBN | 2.00E-59 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G16780.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03910 | 17032 | 17442 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.110 |
| SRR1783600 | control | 0.244 |
| SRR1783602 | moderate drought stress | 1.859 |
| SRR1811619 | moderate drought stress | 2.672 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.881 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.222 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 139.147 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 143.426 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 30.192 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 33.847 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.405 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.536 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.530 |
| SRR2868004 | Drought Stress (root) | 0.574 |
| SRR2967015 | Control (root) | 0.092 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 51.339 |
| SRR9715740 | Leaf | 32.654 |
| SRR9715741 | Leaf | 131.198 |
| SRR9715739 | Root | 17.915 |
| SRR9715742 | Root | 3.959 |
| SRR9715743 | Root | 8.173 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 671.963 |
| SRR8749028 | MeJA induced 9h | 716.441 |
| SRR8749029 | MeJA induced 9h | 1311.526 |
| SRR8749030 | Uninduced | 324.180 |
| SRR8749031 | Uninduced | 445.320 |
| SRR8749032 | Uninduced | 930.349 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.005 |
| SRR8400027 | Control - Root | 1.009 |