Gene detail information of Glyur003878s00045037 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G32240.1 | 4.00E-45 | |
| NR | XP_006590781.1 | 0 | PREDICTED: putative leucine-rich repeat-containing protein DDB_G0290503-like [Glycine max] |
| trEMBL | tr|I1LIN2|I1LIN2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G10210.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03878 | 15224 | 18265 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.794 |
| SRR1783600 | control | 1.805 |
| SRR1783602 | moderate drought stress | 0.724 |
| SRR1811619 | moderate drought stress | 0.650 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.936 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.763 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.874 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.016 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.389 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.477 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.485 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.331 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.948 |
| SRR2868004 | Drought Stress (root) | 2.744 |
| SRR2967015 | Control (root) | 2.905 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.859 |
| SRR9715740 | Leaf | 0.049 |
| SRR9715741 | Leaf | 0.708 |
| SRR9715739 | Root | 0.021 |
| SRR9715742 | Root | 0.702 |
| SRR9715743 | Root | 0.613 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.194 |
| SRR8749028 | MeJA induced 9h | 0.314 |
| SRR8749029 | MeJA induced 9h | 0.587 |
| SRR8749030 | Uninduced | 0.116 |
| SRR8749031 | Uninduced | 0.261 |
| SRR8749032 | Uninduced | 0.287 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.788 |
| SRR8400027 | Control - Root | 2.069 |