Gene detail information of Glyur003850s00041573 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KGN54359.1 | 1.67E-11 | hypothetical protein Csa_4G308495 [Cucumis sativus] |
| trEMBL | tr|K4C1U7|K4C1U7_SOLLC | 4.00E-17 | Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc05g052660.1.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03850 | 18168 | 19425 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.591 |
| SRR1783600 | control | 1.452 |
| SRR1783602 | moderate drought stress | 1.237 |
| SRR1811619 | moderate drought stress | 1.901 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.739 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.095 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.342 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.504 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.171 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.151 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.312 |
| SRR9715740 | Leaf | 2.204 |
| SRR9715741 | Leaf | 1.525 |
| SRR9715739 | Root | 3.771 |
| SRR9715742 | Root | 4.104 |
| SRR9715743 | Root | 2.766 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.199 |
| SRR8749028 | MeJA induced 9h | 0.188 |
| SRR8749029 | MeJA induced 9h | 0.174 |
| SRR8749030 | Uninduced | 0.049 |
| SRR8749031 | Uninduced | 0.107 |
| SRR8749032 | Uninduced | 0.027 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.012 |
| SRR8400027 | Control - Root | 3.457 |