Gene detail information of Glyur003845s00043035 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G74640.1 | 5.00E-124 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_004508744.1 | 0 | PREDICTED: uncharacterized protein LOC101509873 isoform X1 [Cicer arietinum] |
| COG | NP_487554.1 | 1.00E-46 | hypothetical protein alr3514 [Nostoc sp. PCC 7120] |
| trEMBL | tr|I1MTT3|I1MTT3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G10810.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03845 | 8514 | 13411 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003845s00043035.1 | PF12697.2 | Abhydrolase_6 | 11 | 260 | 4.20E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.935 |
| SRR1783600 | control | 21.106 |
| SRR1783602 | moderate drought stress | 20.549 |
| SRR1811619 | moderate drought stress | 20.467 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 30.267 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 29.900 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 20.074 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 19.543 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.560 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 26.554 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 43.789 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 43.753 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.892 |
| SRR2868004 | Drought Stress (root) | 9.507 |
| SRR2967015 | Control (root) | 9.706 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 30.202 |
| SRR9715740 | Leaf | 78.396 |
| SRR9715741 | Leaf | 30.288 |
| SRR9715739 | Root | 17.203 |
| SRR9715742 | Root | 18.021 |
| SRR9715743 | Root | 15.808 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.118 |
| SRR8749028 | MeJA induced 9h | 11.406 |
| SRR8749029 | MeJA induced 9h | 10.079 |
| SRR8749030 | Uninduced | 10.586 |
| SRR8749031 | Uninduced | 4.577 |
| SRR8749032 | Uninduced | 4.829 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.937 |
| SRR8400027 | Control - Root | 19.154 |