Gene detail information of Glyur003833s00037807 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003596989.1 | 4.82E-49 | hypothetical protein MTR_2g088370 [Medicago truncatula] |
| trEMBL | tr|G7ITZ6|G7ITZ6_MEDTR | 2.00E-49 | Uncharacterized protein {ECO:0000313|EMBL:AFK34382.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03833 | 7709 | 8137 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003833s00037807.1 | PF14009.1 | DUF4228 | 24 | 137 | 6.10E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.106 |
| SRR1783600 | control | 4.281 |
| SRR1783602 | moderate drought stress | 3.056 |
| SRR1811619 | moderate drought stress | 2.918 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.818 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.030 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.532 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.505 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.638 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.997 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.217 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.079 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.029 |
| SRR2868004 | Drought Stress (root) | 9.848 |
| SRR2967015 | Control (root) | 8.842 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.148 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.219 |
| SRR9715742 | Root | 1.417 |
| SRR9715743 | Root | 1.747 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 58.624 |
| SRR8749028 | MeJA induced 9h | 30.971 |
| SRR8749029 | MeJA induced 9h | 62.712 |
| SRR8749030 | Uninduced | 1.886 |
| SRR8749031 | Uninduced | 2.446 |
| SRR8749032 | Uninduced | 0.881 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.995 |
| SRR8400027 | Control - Root | 16.487 |