Gene detail information of Glyur003822s00043085


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G54010.13.00E-49FKBP-type peptidyl-prolyl cis-trans isomerase family protein
NRXP_004513281.13.95E-103PREDICTED: peptidyl-prolyl cis-trans isomerase PASTICCINO1-like [Cicer arietinum]
COGYP_005595195.12.00E-06hypothetical protein Bint_1999 [Brachyspira intermedia PWS/A]
Swissprottr|Q7DMA9|PAS1_ARATH2.00E-59Peptidyl-prolyl cis-trans isomerase PASTICCINO1
trEMBLtr|C6T5X7|C6T5X7_SOYBN2.00E-100Putative uncharacterized protein {ECO:0000313|EMBL:ACU17169.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold0382222367431+


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur003822s00043085.1PF13414.1TPR_11521131.50E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.681
SRR1783600control13.191
SRR1783602moderate drought stress13.699
SRR1811619moderate drought stress13.988

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.921
DRR006520Root Summer glycyrrhizin high producing strain16.704
DRR006521Root Winter glycyrrhizin high producing strain20.498
DRR006522Root Winter glycyrrhizin high producing strain21.683
DRR006523Root Summer glycyrrhizin low producing strain14.491
DRR006524Root Summer glycyrrhizin low producing strain15.240
DRR006525Leaf Summer glycyrrhizin high producing strain10.547
DRR006526Leaf Summer glycyrrhizin high producing strain11.013

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)21.713
SRR2868004Drought Stress (root)11.336
SRR2967015Control (root)12.858

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf17.125
SRR9715740Leaf19.613
SRR9715741Leaf21.608
SRR9715739Root1.547
SRR9715742Root6.206
SRR9715743Root5.990

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h32.394
SRR8749028MeJA induced 9h30.395
SRR8749029MeJA induced 9h31.914
SRR8749030Uninduced73.976
SRR8749031Uninduced93.186
SRR8749032Uninduced55.132

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root21.902
SRR8400027Control - Root21.106

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved