Gene detail information of Glyur003811s00045476 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G21410.1 | 2.00E-19 | cysteine-rich RLK (RECEPTOR-like protein kinase) 29 |
| NR | XP_007143157.1 | 7.91E-70 | hypothetical protein PHAVU_007G048600g [Phaseolus vulgaris] |
| Swissprot | tr|O49564|CRK27_ARATH | 1.00E-24 | Cysteine-rich receptor-like protein kinase 27 (Precursor) |
| trEMBL | tr|K7LLE3|K7LLE3_SOYBN | 2.00E-70 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G39991.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03811 | 8319 | 10811 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003811s00045476.1 | PF01657.12 | Stress-antifung | 34 | 121 | 6.70E-18 |
| Glyur003811s00045476.1 | PF01657.12 | Stress-antifung | 138 | 239 | 1.60E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.296 |
| SRR1783600 | control | 0.232 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.014 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.014 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.121 |
| SRR2868004 | Drought Stress (root) | 0.309 |
| SRR2967015 | Control (root) | 0.133 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.562 |
| SRR9715740 | Leaf | 11.567 |
| SRR9715741 | Leaf | 23.790 |
| SRR9715739 | Root | 0.021 |
| SRR9715742 | Root | 1.450 |
| SRR9715743 | Root | 1.052 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.723 |
| SRR8749028 | MeJA induced 9h | 22.364 |
| SRR8749029 | MeJA induced 9h | 13.305 |
| SRR8749030 | Uninduced | 14.880 |
| SRR8749031 | Uninduced | 4.181 |
| SRR8749032 | Uninduced | 5.187 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.055 |
| SRR8400027 | Control - Root | 0.199 |