Gene detail information of Glyur003795s00042833 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G01490.2 | 9.00E-07 | Heavy metal transport/detoxification superfamily protein |
| NR | AFK36567.1 | 5.19E-41 | unknown [Lotus japonicus] |
| trEMBL | tr|I3S8H5|I3S8H5_LOTJA | 2.00E-41 | Uncharacterized protein {ECO:0000313|EMBL:AFK36567.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03795 | 11620 | 12539 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.781 |
| SRR1783600 | control | 16.273 |
| SRR1783602 | moderate drought stress | 8.186 |
| SRR1811619 | moderate drought stress | 8.035 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 260.327 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 264.633 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.564 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.932 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 171.941 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 184.150 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 42.827 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 42.323 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.199 |
| SRR2868004 | Drought Stress (root) | 11.687 |
| SRR2967015 | Control (root) | 43.838 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 52.233 |
| SRR9715740 | Leaf | 40.994 |
| SRR9715741 | Leaf | 26.926 |
| SRR9715739 | Root | 27.074 |
| SRR9715742 | Root | 89.671 |
| SRR9715743 | Root | 79.994 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.051 |
| SRR8749028 | MeJA induced 9h | 0.680 |
| SRR8749029 | MeJA induced 9h | 3.024 |
| SRR8749030 | Uninduced | 2.485 |
| SRR8749031 | Uninduced | 0.046 |
| SRR8749032 | Uninduced | 0.128 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 27.023 |
| SRR8400027 | Control - Root | 102.495 |