Gene detail

Gene detail information of Glyur003786s00040817

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G56850.1	2.00E-51	ABA-responsive element binding protein 3
NR	XP_004489632.1	9.05E-144	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2-like [Cicer arietinum]
Swissprot	tr\|Q9LES3\|AI5L2_ARATH	9.00E-97	ABSCISIC ACID-INSENSITIVE 5-like protein 2
trEMBL	tr\|I1K1W3\|I1K1W3_SOYBN	5.00E-140	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA05G13890.1}

Sequence

Transcript Sequence

>Glyur003786s00040817.1
CCCAAAGGTAAAATTGAAATGCCCATTTTTTTATTCAGAGGATATCAGTGTTTGGCTTCTGCAGCAAAAATAAAACTGGTATAAGCATTAAGCAGTGCCTCAAAGAAACTGGCTGTGTTAGGATTGATTTCCGGAGGCTTAGGAGGAAAATGGGATCTCAAAGTGGGGAAGACCAGGAGCCAACAAGGGGTGCACCTTTGTCTAGGTCAGGGTCCCTTTATAATCTGACACTTGATGAAGTGCAGAACCAGCTTGGGAATTTGGGGAAGCCACTTGGAAGCATGAATCTGGANGAGCTTCTCAAGAGTGTGTGGAGTGCTGAAGCTGGTGGTGGTGGTGAGGTCTCTGGGTTGGATTTTGGTGGTGGTGGTGGTGATGCTAACATGCAGCAGCATGGTCAGGTTGCTGCTTCTGGGTACTCACTTAACCCACAAGGGAGCATAACTTTATCTGGGGATCTTAGCAAGAAAACTGTTGATGAGGTTTGGAAAGATATGCAACTAAAGAAGATCAGTGATAGGGATAGAAAAGCACAGGAGAGACAACCTACACTTGGTGAGATGACCCTGGAGGATTTCTTGGTGAAGGCTGGGGTGGTTGCTGATGATACATTTCATGCCAAGAATGGTGCTTTATCAGGGGTTGATGATTCAAATGGGGATTCCCGGCAACAAGATGTTTCGCAACATGGCCATTGGATGCAATTCCAGCTCCCTTCAGTGCAGCAGCAGCCTCCACAGAACCAACACTATCAGAATAATATGATGGGGGGTTTTGTGGCTGGCCATGCCATTCAACAGCCTTTCCAGATGGCAGGGAACCCNGTTTCGGATGCAGCAATGTCACCGTCTTCTTTAATGGGTACAATATCGGATACGCAAACTTTAGGCCNGAAAAGGGTTGCCTCTGGTATTGTGGTAGAGAAAACTGTGGAGAGGAGGCAAAAGAGGATGATTAAAAATAGGGAATCTGCAGCTCGGTCACGGGCAAGAAGACAGGCTTACACACAAGAACTGGAACTTAAAGTTTCACGTTTAGAAGAGGAAAACGAAAGGCTTAGAAGACAGAATGAGATAGAGAGGGTGTTGCCATGTGTGCCACCACCTGANCCTAAGAAGCATCAACTTCGCAGAACAAGTTCAGCAAACTTTTGATGTCTTCATTGCAATGAGTTCCTTATTCTTTTTTCATGCTATTATCTATCTCATCTTATAGTTTCTCATGTGCATTATTATACTTTTGAGGTAGCTGTTTCTTGTTTAGTGATGCTATCAGTACTCCACAGCTTGTTCTATTCCACAAAAGTTTTCCTGTATCTATATTTTGATAAGACTGAACATTTAAGCAGCACTTATAATTATA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold03786	8343	12633	+

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function

GO:0003700 transcription factor activity, sequence-specific DNA binding

GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur003786s00040817.1	PF00170.16	bZIP_1	263	307	4.10E-11
Glyur003786s00040817.2	PF00170.16	bZIP_1	263	307	4.10E-11

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	16.511
SRR1783600	control	16.851
SRR1783602	moderate drought stress	15.517
SRR1811619	moderate drought stress	15.501

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	55.859
DRR006520	Root Summer glycyrrhizin high producing strain	54.460
DRR006521	Root Winter glycyrrhizin high producing strain	16.614
DRR006522	Root Winter glycyrrhizin high producing strain	16.165
DRR006523	Root Summer glycyrrhizin low producing strain	41.208
DRR006524	Root Summer glycyrrhizin low producing strain	41.111
DRR006525	Leaf Summer glycyrrhizin high producing strain	14.789
DRR006526	Leaf Summer glycyrrhizin high producing strain	14.545

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	48.663
SRR2868004	Drought Stress (root)	41.915
SRR2967015	Control (root)	46.248

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	18.056
SRR9715740	Leaf	20.242
SRR9715741	Leaf	24.393
SRR9715739	Root	22.024
SRR9715742	Root	33.090
SRR9715743	Root	29.166

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	14.659
SRR8749028	MeJA induced 9h	15.065
SRR8749029	MeJA induced 9h	10.422
SRR8749030	Uninduced	28.389
SRR8749031	Uninduced	15.645
SRR8749032	Uninduced	16.050

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	47.818
SRR8400027	Control - Root	45.009