Gene detail information of Glyur003768s00042948 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G30410.2 | 5.00E-19 | sequence-specific DNA binding transcription factors |
| NR | XP_007154829.1 | 8.26E-62 | hypothetical protein PHAVU_003G151300g [Phaseolus vulgaris] |
| Swissprot | tr|Q9SKX1|IBH1_ARATH | 5.00E-08 | Transcription factor IBH1 |
| trEMBL | tr|V7CBU4|V7CBU4_PHAVU | 3.00E-62 | Uncharacterized protein {ECO:0000313|EMBL:ESW26823.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03768 | 15013 | 15522 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.997 |
| SRR1783600 | control | 10.919 |
| SRR1783602 | moderate drought stress | 5.281 |
| SRR1811619 | moderate drought stress | 5.037 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.505 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.156 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.768 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.854 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.448 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.985 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 36.516 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 37.616 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 25.019 |
| SRR2868004 | Drought Stress (root) | 31.262 |
| SRR2967015 | Control (root) | 28.193 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 61.860 |
| SRR9715740 | Leaf | 55.046 |
| SRR9715741 | Leaf | 61.649 |
| SRR9715739 | Root | 1.559 |
| SRR9715742 | Root | 15.274 |
| SRR9715743 | Root | 14.243 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 84.510 |
| SRR8749028 | MeJA induced 9h | 59.662 |
| SRR8749029 | MeJA induced 9h | 110.061 |
| SRR8749030 | Uninduced | 15.900 |
| SRR8749031 | Uninduced | 15.580 |
| SRR8749032 | Uninduced | 25.582 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 25.098 |
| SRR8400027 | Control - Root | 34.161 |