Gene detail information of Glyur003746s00039786 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G05200.1 | 3.00E-29 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25 |
| NR | KHN26412.1 | 2.29E-127 | Cysteine-rich receptor-like protein kinase 10 [Glycine soja] |
| Swissprot | tr|Q8S9L6|CRK29_ARATH | 2.00E-36 | Cysteine-rich receptor-like protein kinase 29 (Precursor) |
| trEMBL | tr|I1KFK8|I1KFK8_SOYBN | 3.00E-152 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G46910.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03746 | 18563 | 21094 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003746s00039786.1 | PF01657.12 | Stress-antifung | 96 | 177 | 1.90E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.745 |
| SRR1783600 | control | 4.173 |
| SRR1783602 | moderate drought stress | 3.111 |
| SRR1811619 | moderate drought stress | 3.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.241 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.393 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.293 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.222 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.925 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.861 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.409 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.887 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.783 |
| SRR2868004 | Drought Stress (root) | 10.862 |
| SRR2967015 | Control (root) | 15.403 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.360 |
| SRR9715740 | Leaf | 7.784 |
| SRR9715741 | Leaf | 6.912 |
| SRR9715739 | Root | 2.542 |
| SRR9715742 | Root | 2.777 |
| SRR9715743 | Root | 2.531 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.541 |
| SRR8749028 | MeJA induced 9h | 3.135 |
| SRR8749029 | MeJA induced 9h | 1.090 |
| SRR8749030 | Uninduced | 3.512 |
| SRR8749031 | Uninduced | 1.994 |
| SRR8749032 | Uninduced | 0.783 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.728 |
| SRR8400027 | Control - Root | 16.793 |