Gene detail information of Glyur003744s00045733 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G78010.1 | 1.00E-04 | tRNA modification GTPase, putative |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03744 | 12401 | 13870 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.246 |
| SRR1783600 | control | 17.370 |
| SRR1783602 | moderate drought stress | 25.146 |
| SRR1811619 | moderate drought stress | 25.565 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.208 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.853 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.085 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.924 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.111 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.012 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.241 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.941 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.744 |
| SRR2868004 | Drought Stress (root) | 5.378 |
| SRR2967015 | Control (root) | 7.496 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.537 |
| SRR9715740 | Leaf | 7.767 |
| SRR9715741 | Leaf | 9.976 |
| SRR9715739 | Root | 7.107 |
| SRR9715742 | Root | 7.854 |
| SRR9715743 | Root | 6.171 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.691 |
| SRR8749028 | MeJA induced 9h | 1.489 |
| SRR8749029 | MeJA induced 9h | 1.669 |
| SRR8749030 | Uninduced | 0.570 |
| SRR8749031 | Uninduced | 0.306 |
| SRR8749032 | Uninduced | 0.250 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.401 |
| SRR8400027 | Control - Root | 25.880 |