Gene detail

Gene detail information of Glyur003736s00044442.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G35370.1	0	S-locus lectin protein kinase family protein
NR	KHN09184.1	0	G-type lectin S-receptor-like serine/threonine-protein kinase [Glycine soja]
COG	YP_004571825.1	1.00E-22	serine/threonine protein kinase [Microlunatus phosphovorus NM-1]
Swissprot	tr\|O65238\|Y5537_ARATH	0	G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 (Precursor)
trEMBL	tr\|K7KUG9\|K7KUG9_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA06G11600.2}

Sequence

Transcript Sequence

>Glyur003736s00044442.1
ATGAAACCCATCACAATNCTCACATACATCTTCCTCTGCTTGATCACTACCACCATCTCCGCCTACACTTTCTCCGATCACATCACCCCAAATTTCAGTGCCTCATATCTCCAATTCATAAACAACGATGGCACCTTCTTACTATCTCGCAACAAAACATTCAAAGCTGCAATATTCAACCCCGATAGTGGCACTCAAAAAACCAGTAATTTCTATCTATGCATCATTCATGTCTCCTCTAGCACCATCACTTGGTCAGCTAACCGTGATTCCCCAATCTCAGATTCTGGTCGAATGAATCTAACCGCCAAAGGGATCACAATTCTAGACAAAGATGGAAACACCAAATGGTCAACACCAAAACTGAAATCAATAGTACACAAACTTGCACTCACTGAGATGGGAAATCTAATCTTACTTGACCAATCCAATGGNTCCCTTTGGGAAAGCTTCAATTACCCAACAGATACAATTGTGATTGGACAGCGTNTACCCGTTGGAGCATCGTTGTCAAGTGCTAATTACACGCTGGCAATTACTTCCNCTGATGCAATACTGCAGTGGCATGGTCAAACATACTGGAAGCTTTCGATGGAAACAAGCGTTTACAAGAATTCGAATAACATGGTGGAATACATGGCAATAAACAGAACAGGTTTTTATCTCTTTGGAAATAATGATGGAACAGTTCCTGTCTATGGAGTTGGGTTGCCTTTGGTTAATTTCAGAATTGCCCAATTGGGTTCCACTGGCCATTTTACTATTAGCAGCTTTTCTAGTGGTACAAACTGGAAGCAGGAATTTGTGGGGCCAGGTAAAGGTTGTCANACTCCCTTAGCTTGTGGCAGAGTTGGTTTGTGTACTGATAACACTGTTTCCTCTACACCTGTTTGTTCTTGTCCACAAAACTTCCATTTAGGCTCAGGTAATAACGGTTGTGTGCCAAATAATGGGTCTTATTCTTTGCCATTAGCTTGCCCTTCTACTGATAAGGAATCAAATTCTTCTTCAGTTGTTTCATTTTTGAGAATAGGGTATGGTGTGGGTTACTTTGGGAATGTTTACTCTGATCCAATTATGTATGGAGTGAACTTATCTGTCTGTCAAGATCTTTGTTCTGGTAACTGTTCCTGCTTGGGAGTTTTCTANAGAAACTCATCTGGTTCTTGCTACATGGTTGAGAATGAATTGGGATCCATTCAGTCAAGTAGTAATGGAGGTGAAGGAGAAGACATGTTGGGATTCATTAAAGCCAATGTTGTGTCTTCAACAACTACTGCTAAAGATGATGAACAAGAAGCTTCTTCTCAGAAAGACGGGTTTCCTGTGGCTGCTGCAGTTCTGTCACCTATTGCTGTATTAGTTCTTATAATGGCTTTAGTTTTCTTCTTAGTACGGAGAAGATTGAAACCATCAAAGACGANGCAAGAGGTGAAATTAGGGAAACAATTCTCACAACATTCTTCAGGGGACCTTGATGCCTTCTACATCCCAGGCTTACCAAGAAGGTTTGACTATGAAGAACTTGAGGAGGCTACTGATAATTTCAAGACTCTAATTGGATCGGGCGCGTTTGGCGCCGTGTACAAGGGTGTGATGCCAGAAAAGACTGTTGTGGCGGTTAAGAAAATAGTGAACATTGGGATTCAAGGAAAAAAAGATTTCTGCACTGAAATTGCTATCATTGGAAATATTCACCATGTTAATTTGGTGAGGCTGAGAGGATTCTGTGCTCAAGGGGGACACCGTTTGTTGGTTTATGAATACATGAACCGTGGATCACTGGATCGCAACCTCTTTGGNAGTAATGGACCGGTTTTAGAGTGGCAAGAGAGGTTAGATGTGGCGCTTGGAACAGCACGGGGACTTGCTTATTTGCATAGTGGCTGTGAGCAGAAGATAATTCACTGTGATATCAAACCTGAGAACATTCTCTTGCAAGATCAGTTCCAGGCCAAGATTTCTGATTTCGGNTTATCAAAACTCCTTAGCCCCGAGCAATCCGGTTTGTTCACAACAATGAGAGGCACTCGTGGGTATCTCGCTCCAGAGTGGCTAACAAACTCCGCGATTTCGGAGAAGACTGATGTTTATAGCTTTGGAATGGTGCTGCTTGAATTGGTTAGCGGAAGGAAGAATTGCTCTTACTATTATAATAATAATAATAATAATAGGTCGAATAGCCATAGCATGGAAAATGAGAGCAATAGTGGCGGTAGCGGNGGTGGTGGTGGTGGCAATTCGTCGAACGCATCATCGACGGGGTTGGTTTATTTTCCGCTGTTTGCGTTGGAGATGCATGAGCAAGGGAGTTACCTGGAGTTGGCTGATCCAAGGCTAGAAGGGCGTGTTANGCGTGATGAGGTGGAGAAGTTGGTTCGTATTGCCTTGTGTTGTGTTCACGAGGAACCAGCGCTTAGGCCAAACATGGTTGCTGTTGTTGGCATGTTGGAAGGTGGGACCCCGTTGCCAATGCCTAGGATGGAGTCTTTGAACTTCTTGCGATTCTATGGCCGNAGAATATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold03736	5261	8245	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.9.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006468 protein phosphorylation

GO:0048544 recognition of pollen

molecular_function

GO:0004672 protein kinase activity

GO:0004674 protein serine/threonine kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur003736s00044442.1	PF01453.19	B_lectin	81	165	1.70E-15
Glyur003736s00044442.1	PF00954.15	S_locus_glycop	246	305	2.20E-05
Glyur003736s00044442.1	PF00069.20	Pkinase	517	724	2.30E-48

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.274
SRR1783600	control	0.282
SRR1783602	moderate drought stress	0.229
SRR1811619	moderate drought stress	0.223

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.306
DRR006524	Root Summer glycyrrhizin low producing strain	0.306
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	14.455
SRR2868004	Drought Stress (root)	16.255
SRR2967015	Control (root)	12.225

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.397
SRR9715740	Leaf	0.178
SRR9715741	Leaf	0.078
SRR9715739	Root	0.326
SRR9715742	Root	0.197
SRR9715743	Root	0.398

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	5.073
SRR8749028	MeJA induced 9h	9.314
SRR8749029	MeJA induced 9h	5.380
SRR8749030	Uninduced	5.505
SRR8749031	Uninduced	3.274
SRR8749032	Uninduced	2.449

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	5.613
SRR8400027	Control - Root	3.761