Gene detail information of Glyur003711s00043459 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G08840.2 | 7.00E-15 | D-alanine--D-alanine ligase family |
| NR | KHN08897.1 | 1.93E-09 | Serine carboxypeptidase-like 45 [Glycine soja] |
| trEMBL | tr|I1JN32|I1JN32_SOYBN | 3.00E-10 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G28080.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03711 | 14669 | 16744 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.302 |
| SRR1783600 | control | 2.318 |
| SRR1783602 | moderate drought stress | 5.108 |
| SRR1811619 | moderate drought stress | 5.245 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.166 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.733 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.022 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.453 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.613 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.040 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.893 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.316 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.191 |
| SRR2868004 | Drought Stress (root) | 11.243 |
| SRR2967015 | Control (root) | 11.176 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.798 |
| SRR9715740 | Leaf | 5.158 |
| SRR9715741 | Leaf | 7.351 |
| SRR9715739 | Root | 0.845 |
| SRR9715742 | Root | 2.017 |
| SRR9715743 | Root | 1.624 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.555 |
| SRR8749028 | MeJA induced 9h | 5.947 |
| SRR8749029 | MeJA induced 9h | 5.110 |
| SRR8749030 | Uninduced | 6.998 |
| SRR8749031 | Uninduced | 4.017 |
| SRR8749032 | Uninduced | 4.848 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.935 |
| SRR8400027 | Control - Root | 19.698 |